RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 A0A1B0GTH6 734 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 LRRD1A4D1F6 860 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 CCNHP51946 323 aaPredicted RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 GUCY2DQ02846 1103 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 ABCB5Q2M3G0 1257 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 FKBP1CQ5VVH2 108 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 MB21D2Q8IYB1 491 aaPredicted RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 UBLCP1Q8WVY7 318 aaPredicted RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 RNPC3Q96LT9 517 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 NSRP1Q9H0G5 558 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 STIM2Q9P246 746 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 DDX20Q9UHI6 824 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 ZNF532Q9HCE3 1301 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 A0A0U1RQJ8 604 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 RANBP6O60518 1105 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 AP1G2O75843 785 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 FAM107AO95990 144 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 TCP1P17987 556 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 MTIF2P46199 727 aaKnown RBP9.52□□□□□ -0.89
DDB1-217ENST00000540166 FXR1P51114 621 aaKnown RBP eCLIP9.52□□□□□ -0.891e-6■■■□□ 17.1
DDB1-217ENST00000540166 HMGCS2P54868 508 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 SLC30A9Q6PML9 568 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 HVCN1Q96D96 273 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 SELENOSQ9BQE4 189 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
DDB1-217ENST00000540166 CXCL11O14625 94 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 COBLO75128 1261 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 VIMP08670 466 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 MDH1P40925 334 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 MRPL12P52815 198 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 PDCD2Q16342 344 aaPredicted RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 PTGISQ16647 500 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CFAP221Q4G0U5 840 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 TDRD12Q587J7 1177 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 TBC1D1Q86TI0 1168 aaPredicted RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 MTMR14Q8NCE2 650 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 CCHCR1Q8TD31 782 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 AGXT2Q9BYV1 514 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 KRT23Q9C075 422 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 HERC5Q9UII4 1024 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 hCG_1642624A0A1W2PR95 340 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CTNND1O60716 968 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 USP2O75604 605 aaPredicted RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 MBD4O95243 580 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 ADCY2Q08462 1091 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 PPIL2Q13356 520 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 LRRC45Q96CN5 670 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 EPB41L5Q9HCM4 733 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 INTS13Q9NVM9 706 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 TPX2Q9ULW0 747 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 IRF6O14896 467 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 ZNF185O15231 689 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CAND2O75155 1236 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CDC27P30260 824 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 ZRSR2Q15696 482 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 YTHDF3Q7Z739 585 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 FUKQ8N0W3 1084 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CCDC197Q8NCU1 140 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 RRP36Q96EU6 259 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 OSBPL9Q96SU4 736 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 LRRC1Q9BTT6 524 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 STK38LQ9Y2H1 464 aa9.51□□□□□ -0.89
DDB1-217ENST00000540166 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
DDB1-217ENST00000540166 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CXCR5P32302 372 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 CTNNA1P35221 906 aaKnown RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 RNASE9P60153 205 aaKnown RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 NR5A1Q13285 461 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 KCNB1Q14721 858 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ZNF174Q15697 407 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 SMYD4Q8IYR2 804 aaPredicted RBP9.5□□□□□ -0.89
DDB1-217ENST00000540166 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 ARMT1Q9H993 441 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 NFU1Q9UMS0 254 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 NUP98P52948 1817 aa9.5□□□□□ -0.89
DDB1-217ENST00000540166 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms