RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 BMP3P12645 472 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 GCFC2P16383 781 aaKnown RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 VCAM1P19320 739 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ABL2P42684 1182 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 STAT2P52630 851 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 HTRA3P83110 453 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 IKQ13123 557 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 TUBB2AQ13885 445 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ZYXQ15942 572 aaKnown RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ARHGAP29Q52LW3 1261 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 DNAJC21Q5F1R6 531 aaKnown RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 RUFY3Q7L099 469 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 LRRC8AQ8IWT6 810 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 MB21D2Q8IYB1 491 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ENAHQ8N8S7 591 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 CTCFLQ8NI51 663 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ACER1Q8TDN7 264 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ZBTB9Q96C00 473 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 MIEF2Q96C03 454 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 TMEM47Q9BQJ4 181 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 TUBB2BQ9BVA1 445 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 RPAP3Q9H6T3 665 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-204ENST00000540083 INCENPQ9NQS7 918 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ST7Q9NRC1 585 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 IL17RBQ9NRM6 502 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 ADAM21Q9UKJ8 722 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 SLC12A7Q9Y666 1083 aa8.42□□□□□ -1.06
NECAP1-204ENST00000540083 A0A1W2PRG0 241 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 MAP2K7O14733 419 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 TLR2O60603 784 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ZBED4O75132 1171 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 FLOT1O75955 427 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 TBC1D8O95759 1140 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 NDUFB10O96000 172 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 GNRH1P01148 92 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ADH1AP07327 375 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RPS6KB1P23443 525 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 HOXD10P28358 340 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SMARCA1P28370 1054 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ELF1P32519 619 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 CTCFP49711 727 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RWDD2BP57060 319 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 JAG1P78504 1218 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RELBQ01201 579 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ADCY2Q08462 1091 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SNW1Q13573 536 aaKnown RBP8.41□□□□□ -1.06
NECAP1-204ENST00000540083 CCDC96Q2M329 555 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 CPLX2Q6PUV4 134 aaKnown RBP8.41□□□□□ -1.06
NECAP1-204ENST00000540083 LBX2Q6XYB7 198 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 GBP6Q6ZN66 633 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SGMS1Q86VZ5 419 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 FAM71BQ8TC56 605 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 IGDCC4Q8TDY8 1250 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RABGGTAQ92696 567 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SH3GL3Q99963 347 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ZKSCAN3Q9BRR0 538 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 GBP3Q9H0R5 595 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 ALDH8A1Q9H2A2 487 aaPredicted RBP8.41□□□□□ -1.06
NECAP1-204ENST00000540083 TMX1Q9H3N1 280 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 DNMT3LQ9UJW3 386 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 RABGAP1Q9Y3P9 1069 aa8.41□□□□□ -1.06
NECAP1-204ENST00000540083 SMIM22K7EJ46 135 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 TRPA1O75762 1119 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 ERLIN2O94905 339 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 SLC25A27O95847 323 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 ZSCAN22P10073 491 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 LMAN1P49257 510 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 OAZ1P54368 228 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 MTA1Q13330 715 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 PLCB4Q15147 1175 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 SEC23AQ15436 765 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 FAM110CQ1W6H9 321 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 AP1ARQ63HQ0 302 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 GPAT2Q6NUI2 795 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 FAM43BQ6ZT52 329 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 STOX1Q6ZVD7 989 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 CYB5R4Q7L1T6 521 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 CCDC84Q86UT8 332 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 LRRC47Q8N1G4 583 aaKnown RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 KDF1Q8NAX2 398 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 MAGEC3Q8TD91 643 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 PTPN18Q99952 460 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 SLF1Q9BQI6 1058 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 MAF1Q9H063 256 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 ASCC2Q9H1I8 757 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 NUP62CLQ9H1M0 184 aa8.4□□□□□ -1.06
NECAP1-204ENST00000540083 ZNF395Q9H8N7 513 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-204ENST00000540083 PDRG1Q9NUG6 133 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms