RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
SCNN1A-215ENST00000540037 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
SCNN1A-215ENST00000540037 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
SCNN1A-215ENST00000540037 TSG101Q99816 390 aa15.28■□□□□ 0.04
SCNN1A-215ENST00000540037 MYH4Q9Y623 1939 aa15.28■□□□□ 0.04
SCNN1A-215ENST00000540037 GMNCA6NCL1 334 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 SART1O43290 800 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 FGFR1OPO95684 399 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 TNNC1P63316 161 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 DDR1Q08345 913 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 BYSLQ13895 437 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 RPS6KA1Q15418 735 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 SOGA3Q5TF21 947 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 FAM228AQ86W67 206 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 SPATS2Q86XZ4 545 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 DNAJC19Q96DA6 116 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 SMTNP53814 917 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 HSPA2P54652 639 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 SIK1P57059 783 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 CCDC121Q6ZUS5 278 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 TRIM31Q9BZY9 425 aa15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.27■□□□□ 0.04
SCNN1A-215ENST00000540037 USP17L5A8MUK1 530 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 KIF4AO95239 1232 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 SLC9A1P19634 815 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 GNA11P29992 359 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 PPP4R3AQ6IN85 833 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 TAF4BQ92750 862 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 SLAIN2Q9P270 581 aa15.27■□□□□ 0.03
SCNN1A-215ENST00000540037 TMCO5BA8MYB1 307 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 E9PMD0 336 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 ABCB11O95342 1321 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 UBE2SQ16763 222 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 METTL13Q8N6R0 699 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 DPH5Q9H2P9 285 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 PANK4Q9NVE7 773 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 STK17AQ9UEE5 414 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 MAGOHP61326 146 aaKnown RBP15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 ASIC2Q16515 512 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 MAGOHBQ96A72 148 aaKnown RBP15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 SEC16BQ96JE7 1060 aa15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 SEC63Q9UGP8 760 aaKnown RBP15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 NOC2LQ9Y3T9 749 aaKnown RBP15.26■□□□□ 0.03
SCNN1A-215ENST00000540037 TTI1O43156 1089 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 COPB2P35606 906 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 FAM26FQ5R3K3 315 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 TRIM59Q8IWR1 403 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 GANQ9H2C0 597 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 ZHX3Q9H4I2 956 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 NR2E1Q9Y466 385 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 CHUKO15111 745 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 TNNI2P48788 182 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 SF3B3Q15393 1217 aaKnown RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 EDEM3Q9BZQ6 932 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 RIC8AQ9NPQ8 531 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 RPS8P62241 208 aaKnown RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 E2F5Q15329 346 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 CEP95Q96GE4 821 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 EYA3Q99504 573 aa15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 AJAP1Q9UKB5 411 aaPredicted RBP15.25■□□□□ 0.03
SCNN1A-215ENST00000540037 KRIT1O00522 736 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 USP11P51784 963 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 KCNH2Q12809 1159 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 ANKRD20A8PQ5CZ79 823 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 CYB5D1Q6P9G0 228 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 IRF2BP2Q7Z5L9 587 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 FUKQ8N0W3 1084 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 LRRC57Q8N9N7 239 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 SYN2Q92777 582 aaPredicted RBP15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 TRIM51Q9BSJ1 452 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 ZBTB48P10074 688 aaPredicted RBP15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 RDXP35241 583 aaKnown RBP15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 PPP2R2AP63151 447 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 TMEM266Q2M3C6 531 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
SCNN1A-215ENST00000540037 AIPL1Q9NZN9 384 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms