RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 CYFIP1Q7L576 1253 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 TMCO2Q7Z6W1 182 aaPredicted RBP8.64□□□□□ -1.03
GNE-205ENST00000539815 SEPT1Q8WYJ6 367 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 STAMQ92783 540 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 MKL1Q969V6 931 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 TRIM6Q9C030 488 aaPredicted RBP8.64□□□□□ -1.03
GNE-205ENST00000539815 HELLSQ9NRZ9 838 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 ERAP1Q9NZ08 941 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
GNE-205ENST00000539815 BMPR1AP36894 532 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 TECP42680 631 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 SMAD4Q13485 552 aaKnown RBP8.64□□□□□ -1.03
GNE-205ENST00000539815 PLPP4Q5VZY2 271 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
GNE-205ENST00000539815 ZNF543Q08ER8 600 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 GTF2IRD1Q9UHL9 959 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 USP18Q9UMW8 372 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 A6NJR5 290 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 B4E1Z4 1266 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 DDX39AO00148 427 aaKnown RBP8.63□□□□□ -1.03
GNE-205ENST00000539815 ID4P47928 161 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 QRICH1Q2TAL8 776 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 ZNF558Q96NG5 402 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 YY1AP1Q9H869 796 aa8.63□□□□□ -1.03
GNE-205ENST00000539815 CARNS1A5YM72 827 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 H0Y858 1186 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 FIBPO43427 364 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 PDE4AP27815 886 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 GDF6Q6KF10 455 aaPredicted RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 CCDC149Q6ZUS6 474 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 HEATR3Q7Z4Q2 680 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 URGCPQ8TCY9 931 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 NECTIN4Q96NY8 510 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 WNT8AQ9H1J5 351 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 ALG13Q9NP73 1137 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 TLR9Q9NR96 1032 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 WDR19Q8NEZ3 1342 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 UQCRHLA0A096LP55 91 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 CD4P01730 458 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 UQCRHP07919 91 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 HOXD11P31277 338 aaPredicted RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 MTHFRP42898 656 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 NT5C2P49902 561 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 MTMR3Q13615 1198 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 PPP2R5DQ14738 602 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 KIAA1755Q5JYT7 1200 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 DGKHQ86XP1 1220 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 RNF135Q8IUD6 432 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 PHKBQ93100 1093 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 PPP1R16BQ96T49 567 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 DNAJC25-GNG10A0A024R161 153 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 GPR182O15218 404 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 SCG2P13521 617 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 TMEM62Q0P6H9 643 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 CCDC12Q8WUD4 166 aaPredicted RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 POF1BQ8WVV4 589 aa8.62□□□□□ -1.03
GNE-205ENST00000539815 SEC62Q99442 399 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 GNEQ9Y223 722 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 CNOT1A5YKK6 2376 aaKnown RBP8.62□□□□□ -1.03
GNE-205ENST00000539815 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 CPLX1O14810 134 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 NCAM2O15394 837 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 NMT2O60551 498 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 TNNT1P13805 278 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 NAPAP54920 295 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 KRT76Q01546 638 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 TWF2Q6IBS0 349 aaKnown RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 CABP7Q86V35 215 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 TMTC2Q8N394 836 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 GPR20Q99678 358 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 NRBP2Q9NSY0 501 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 TCF20Q9UGU0 1960 aaKnown RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 ZFHX2Q9C0A1 2572 aaPredicted RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 LAG3P18627 525 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 TAF12Q16514 161 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 GLB1LQ6UWU2 654 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 CASP10Q92851 521 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 ARIH1Q9Y4X5 557 aaPredicted RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 SLC12A7Q9Y666 1083 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 AK2P54819 239 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 SETQ01105 290 aaPredicted RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 MTERF4Q7Z6M4 381 aaKnown RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 NCOA7Q8NI08 942 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 DNAJB3Q8WWF6 145 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 INO80BQ9C086 356 aaPredicted RBP8.61□□□□□ -1.03
GNE-205ENST00000539815 GLT8D2Q9H1C3 349 aa8.61□□□□□ -1.03
GNE-205ENST00000539815 GMEB2Q9UKD1 530 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms