RNA–Protein interactions for RNA: ENST00000539659.5

ATF7IP-213, Transcript of activating transcription factor 7 interacting protein, human

TSL 2

Gene ATF7IP, Length 2,298 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF7IP-213	ENST00000539659	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GAP43	P17677	238 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NCBP1	Q09161	790 aa	Known RBP	13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	UIMC1	Q96RL1	719 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	DESI2	Q9BSY9	194 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	FGFBP2	Q9BYJ0	223 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	OLFML3	Q9NRN5	406 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	MYO1A	Q9UBC5	1043 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	UBIAD1	Q9Y5Z9	338 aa		13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ASTN2	O75129	1339 aa	Predicted RBP	13.73	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GAS7	O60861	476 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	VCAM1	P19320	739 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	BACE1	P56817	501 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PCNX4	Q63HM2	1172 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	C1orf186	Q6ZWK4	172 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	CCDC170	Q8IYT3	715 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TSC1	Q92574	1164 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	REEP2	Q9BRK0	252 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	AS3MT	Q9HBK9	375 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZNF215	Q9UL58	517 aa	Predicted RBP	13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ADAMTS5	Q9UNA0	930 aa		13.72	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZNF541	Q9H0D2	1346 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PDXK	O00764	312 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NKRF	O15226	690 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	KRT18	P05783	430 aa	Known RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	AR	P10275	920 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ITGB5	P18084	799 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GNG11	P61952	73 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TSR1	Q2NL82	804 aa	Known RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	RINT1	Q6NUQ1	792 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TRIM59	Q8IWR1	403 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NACC1	Q96RE7	527 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZNF577	Q9BSK1	485 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TEKT3	Q9BXF9	490 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	RGL1	Q9NZL6	768 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	COL20A1	Q9P218	1284 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	FAM184B	Q9ULE4	1060 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GJA3	Q9Y6H8	435 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	IPO5	O00410	1097 aa	Known RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TRAF5	O00463	557 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NFIB	O00712	420 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZBED4	O75132	1171 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NDUFA10	O95299	355 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PTPRA	P18433	802 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TRIM21	P19474	475 aa	Known RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZNF131	P52739	623 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	OAZ1	P54368	228 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	MAP3K9	P80192	1104 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TUBB2A	Q13885	445 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NFIL3	Q16649	462 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	NOL9	Q5SY16	702 aa	Known RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	ZNF397	Q8NF99	534 aa	Predicted RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	EEF2KMT	Q96G04	330 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	WDR24	Q96S15	920 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	CHP1	Q99653	195 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	TUBB2B	Q9BVA1	445 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PDCL3	Q9H2J4	239 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	BHMT2	Q9H2M3	363 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	AGPAT5	Q9NUQ2	364 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GPRC5D	Q9NZD1	345 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	SEL1L	Q9UBV2	794 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	PLAGL2	Q9UPG8	496 aa		13.71	□□□□□ -0.21
ATF7IP-213	ENST00000539659	GOLGB1	Q14789	3259 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	C19orf81	C9J6K1	198 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	PES1	O00541	588 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	DHX15	O43143	795 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	ARHGAP25	P42331	645 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	MTMR2	Q13614	643 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	KNOP1	Q1ED39	458 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	XRRA1	Q6P2D8	792 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	ZNF280C	Q8ND82	737 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	DYDC2	Q96IM9	177 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	RUSC1	Q9BVN2	902 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	UNC45A	Q9H3U1	944 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	JADE2	Q9NQC1	790 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	SCAF8	Q9UPN6	1271 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	EIF3D	O15371	548 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	LYPLA2	O95372	231 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	CASQ1	P31415	396 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	HOXD13	P35453	343 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	CYP4A11	Q02928	519 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	PPP2R3A	Q06190	1150 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	SFR1	Q86XK3	245 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	GPC2	Q8N158	579 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	REPS2	Q8NFH8	660 aa		13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	REXO2	Q9Y3B8	237 aa	Known RBP	13.7	□□□□□ -0.22
ATF7IP-213	ENST00000539659	VWA5A	O00534	786 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	ATP2A1	O14983	1001 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	CETN3	O15182	167 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	KIF5C	O60282	957 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	FLOT1	O75955	427 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	RBM10	P98175	930 aa	Known RBP	13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	SPP2	Q13103	211 aa		13.69	□□□□□ -0.22
ATF7IP-213	ENST00000539659	FRMD5	Q7Z6J6	570 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms