RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GDF6Q6KF10 455 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-206ENST00000539417 ETNPPLQ8TBG4 499 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 SEPT1Q8WYJ6 367 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 BRMS1Q9HCU9 246 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
RPAIN-206ENST00000539417 H3BRB1 525 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 CLTBP09497 229 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 SLC5A5Q92911 643 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 SNX21Q969T3 373 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 RNPEPQ9H4A4 650 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 TUT1Q9H6E5 874 aaKnown RBP17.86■□□□□ 0.45
RPAIN-206ENST00000539417 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
RPAIN-206ENST00000539417 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
RPAIN-206ENST00000539417 CCNT1O60563 726 aaKnown RBP17.85■□□□□ 0.45
RPAIN-206ENST00000539417 CYP2C9P11712 490 aa17.85■□□□□ 0.45
RPAIN-206ENST00000539417 NFRKBQ6P4R8 1299 aa17.85■□□□□ 0.45
RPAIN-206ENST00000539417 MOXD1Q6UVY6 613 aa17.85■□□□□ 0.45
RPAIN-206ENST00000539417 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
RPAIN-206ENST00000539417 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
RPAIN-206ENST00000539417 DCDC2CA8MYV0 355 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 LGR5O75473 907 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 PSMD10O75832 226 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 ATG7O95352 703 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 ATP2B1P20020 1258 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 MARK3P27448 753 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 MDM2Q00987 491 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-206ENST00000539417 SAFBQ15424 915 aaKnown RBP eCLIP17.84■□□□□ 0.45
RPAIN-206ENST00000539417 PRPF38BQ5VTL8 546 aaKnown RBP17.84■□□□□ 0.45
RPAIN-206ENST00000539417 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 ABHD15Q6UXT9 468 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 HAS1Q92839 578 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 FOXP1Q9H334 677 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-206ENST00000539417 UNC45AQ9H3U1 944 aa17.84■□□□□ 0.45
RPAIN-206ENST00000539417 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-206ENST00000539417 MROH7Q68CQ1 1323 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 KIAA0355O15063 1070 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 MAGEA10P43363 369 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-206ENST00000539417 NBR1Q14596 966 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 SESTD1Q86VW0 696 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 CCDC60Q8IWA6 550 aaPredicted RBP17.83■□□□□ 0.45
RPAIN-206ENST00000539417 WNT8BQ93098 351 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 KCNMB3Q9NPA1 279 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 TBC1D22BQ9NU19 505 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.45
RPAIN-206ENST00000539417 TRIP12Q14669 1992 aaPredicted RBP17.83■□□□□ 0.44
RPAIN-206ENST00000539417 CHMP2AO43633 222 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 SUPT20HL2P0C7V6 817 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 SMIM10L2AP0DMW4 78 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 SMIM10L2BP0DMW5 78 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 ATP4AP20648 1035 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 U2AF2P26368 475 aaKnown RBP eCLIP17.82■□□□□ 0.442e-8■□□□□ 9.8
RPAIN-206ENST00000539417 LRCH2Q5VUJ6 765 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 B3GNT9Q6UX72 402 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 NOSTRINQ8IVI9 506 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 C7orf31Q8N865 590 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
RPAIN-206ENST00000539417 BADQ92934 168 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 ZBTB10Q96DT7 871 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 PPP1R12CQ9BZL4 782 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 EMSYQ7Z589 1322 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 GAS7O60861 476 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 CYP2C18P33260 490 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-206ENST00000539417 ZNF746Q6NUN9 644 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-206ENST00000539417 CHRDL2Q6WN34 429 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 GLG1Q92896 1179 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 RIT2Q99578 217 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 GDF15Q99988 308 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
RPAIN-206ENST00000539417 EML1O00423 815 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 GCFC2P16383 781 aaKnown RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 HOXC8P31273 242 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 ZNF174Q15697 407 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 PTGISQ16647 500 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 UGCGQ16739 394 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 SWSAP1Q6NVH7 229 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 NOC4LQ9BVI4 516 aaKnown RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 TEKT3Q9BXF9 490 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 SMARCAD1Q9H4L7 1026 aa17.81■□□□□ 0.44
RPAIN-206ENST00000539417 COLQQ9Y215 455 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-206ENST00000539417 WDR81Q562E7 1941 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 TREHO43280 583 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 MCM7P33993 719 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 STAT5BP51692 787 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 EPHB4P54760 987 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 KRT76Q01546 638 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 PLCB4Q15147 1175 aa17.8■□□□□ 0.44
RPAIN-206ENST00000539417 SEZ6LQ9BYH1 1024 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms