RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 FAM184AQ8NB25 1140 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 ETNPPLQ8TBG4 499 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 SEPT1Q8WYJ6 367 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 PCYT2Q99447 389 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 GDF15Q99988 308 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 ZNF577Q9BSK1 485 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
PRPF19-203ENST00000539180 GTF2IRD1Q9UHL9 959 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 SIP14410 1827 aa17.03■□□□□ 0.32
PRPF19-203ENST00000539180 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 H3BRB1 525 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 ATG7O95352 703 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.32
PRPF19-203ENST00000539180 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
PRPF19-203ENST00000539180 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 SLC5A5Q92911 643 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 TRPV6Q9H1D0 765 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 TUT1Q9H6E5 874 aaKnown RBP17.02■□□□□ 0.32
PRPF19-203ENST00000539180 TBC1D22BQ9NU19 505 aa17.02■□□□□ 0.32
PRPF19-203ENST00000539180 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
PRPF19-203ENST00000539180 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.31
PRPF19-203ENST00000539180 WNT7AO00755 349 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 HIC1Q14526 733 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 FAM47CQ5HY64 1035 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
PRPF19-203ENST00000539180 B3GNT9Q6UX72 402 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 KCNMB3Q9NPA1 279 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 TMEM39AQ9NV64 488 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 HDAC6Q9UBN7 1215 aa17.01■□□□□ 0.31
PRPF19-203ENST00000539180 DDX25Q9UHL0 483 aaKnown RBP17.01■□□□□ 0.31
PRPF19-203ENST00000539180 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
PRPF19-203ENST00000539180 KIF28PB7ZC32 967 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
PRPF19-203ENST00000539180 PSMD10O75832 226 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 GJB2P29033 226 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 KRT76Q01546 638 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 SCN5AQ14524 2016 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 ZNF746Q6NUN9 644 aaPredicted RBP17■□□□□ 0.31
PRPF19-203ENST00000539180 ABHD15Q6UXT9 468 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 SNX21Q969T3 373 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 RIT2Q99578 217 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
PRPF19-203ENST00000539180 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
PRPF19-203ENST00000539180 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
PRPF19-203ENST00000539180 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 KIF3AQ9Y496 699 aa17■□□□□ 0.31
PRPF19-203ENST00000539180 UMODL1Q5DID0 1318 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 IGSF9BQ9UPX0 1349 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 K7ELQ4 463 aaPredicted RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 SMIM10L2AP0DMW4 78 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 SMIM10L2BP0DMW5 78 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 BMP8BP34820 402 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 RBL2Q08999 1139 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 CCDC60Q8IWA6 550 aaPredicted RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 SMAP1Q8IYB5 467 aaPredicted RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 AFAP1L1Q8TED9 768 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 GJA10Q969M2 543 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 UIMC1Q96RL1 719 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 ERAP1Q9NZ08 941 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
PRPF19-203ENST00000539180 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
PRPF19-203ENST00000539180 TIMP1P01033 207 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 RAG1P15918 1043 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRPF19-203ENST00000539180 ADAM17P78536 824 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-203ENST00000539180 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 BADQ92934 168 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 HIPK3Q9H422 1215 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 SMARCAD1Q9H4L7 1026 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 SMC3Q9UQE7 1217 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
PRPF19-203ENST00000539180 WDR64B1ANS9 1081 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 TBX3O15119 743 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 CCNT1O60563 726 aaKnown RBP16.97■□□□□ 0.31
PRPF19-203ENST00000539180 GAS7O60861 476 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 CYP2C9P11712 490 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 CHMP4BP1P59074 171 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 PTGISQ16647 500 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 PLPPR4Q7Z2D5 763 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 HAS1Q92839 578 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 WNT8BQ93098 351 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 TEKT3Q9BXF9 490 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 UNC45AQ9H3U1 944 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
PRPF19-203ENST00000539180 COLQQ9Y215 455 aaPredicted RBP16.97■□□□□ 0.31
PRPF19-203ENST00000539180 MYH15Q9Y2K3 1946 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms