RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 FGD4Q96M96 766 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 PLIN2Q99541 437 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 SENP7Q9BQF6 1050 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 KCNA2P16389 499 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 AFMP43652 599 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 GRB10Q13322 594 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 ARHGEF6Q15052 776 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 PDXDC2PQ6P474 469 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 DNM3Q9UQ16 869 aa17.25■□□□□ 0.35
VAMP1-207ENST00000539047 MYH9P35579 1960 aaKnown RBP17.25■□□□□ 0.35
VAMP1-207ENST00000539047 POTEB3A0JP26 581 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
VAMP1-207ENST00000539047 RGS20O76081 388 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 PSAPP07602 524 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 HOXC6P09630 235 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 PSMC4P43686 418 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
VAMP1-207ENST00000539047 SP3Q02447 781 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 CYP4A11Q02928 519 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 PNOCQ13519 176 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 STX1AQ16623 288 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 POTEBQ6S5H4 581 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 RAD54LQ92698 747 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 PAGE5Q96GU1 130 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 TINF2Q9BSI4 451 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
VAMP1-207ENST00000539047 RMND1Q9NWS8 449 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
VAMP1-207ENST00000539047 POTEFA5A3E0 1075 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 EML1O00423 815 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
VAMP1-207ENST00000539047 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
VAMP1-207ENST00000539047 MED24O75448 989 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 TRPA1O75762 1119 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 TBC1D8O95759 1140 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
VAMP1-207ENST00000539047 P4HBP07237 508 aaKnown RBP17.23■□□□□ 0.35
VAMP1-207ENST00000539047 UBA1P22314 1058 aaKnown RBP17.23■□□□□ 0.35
VAMP1-207ENST00000539047 HOXD10P28358 340 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 IRF5Q13568 498 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 LXNQ9BS40 222 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 TSKSQ9UJT2 592 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 PCDHA10Q9Y5I2 948 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 ZSWIM8A7E2V4 1837 aa17.23■□□□□ 0.35
VAMP1-207ENST00000539047 DOCK3Q8IZD9 2030 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 ATP9AO75110 1047 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 GGPS1O95749 300 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 CYP2B6P20813 491 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 QARSP47897 775 aaKnown RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 SP4Q02446 784 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 TYRO3Q06418 890 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 METTL7BQ6UX53 244 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 B3GNT9Q6UX72 402 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 TRIML1Q8N9V2 468 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 NPLOC4Q8TAT6 608 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 NAT10Q9H0A0 1025 aaKnown RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 ZSWIM4Q9H7M6 989 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 ANO10Q9NW15 660 aa17.22■□□□□ 0.35
VAMP1-207ENST00000539047 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
VAMP1-207ENST00000539047 ARID2Q68CP9 1835 aa17.21■□□□□ 0.35
VAMP1-207ENST00000539047 BACH1O14867 736 aa17.21■□□□□ 0.35
VAMP1-207ENST00000539047 CAVIN2O95810 425 aa17.21■□□□□ 0.35
VAMP1-207ENST00000539047 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
VAMP1-207ENST00000539047 ACTR2P61160 394 aa17.21■□□□□ 0.35
VAMP1-207ENST00000539047 PSMC5P62195 406 aa17.21■□□□□ 0.35
VAMP1-207ENST00000539047 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms