RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 BCCIPQ9P287 314 aaKnown RBP eCLIP9.79□□□□□ -0.84
GGA3-202ENST00000538886 DNM3Q9UQ16 869 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ZNF536O15090 1300 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 CASP8AP2Q9UKL3 1982 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 LRRIQ4A6NIV6 560 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 RCAN1P53805 252 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ASIC1P78348 528 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 KARSQ15046 597 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 SLC35G1Q2M3R5 365 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 HAUS3Q68CZ6 603 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 FBXO46Q6PJ61 603 aaPredicted RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 DEFB128Q7Z7B8 93 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 C10orf67Q8IYJ2 551 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 MXRA8Q9BRK3 442 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 APOL6Q9BWW8 343 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 NRBP2Q9NSY0 501 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ZMYND8Q9ULU4 1186 aaPredicted RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ADAMTSL1Q8N6G6 1762 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ATP9AO75110 1047 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 UPP2O95045 317 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 DGKDQ16760 1214 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 SPOUT1Q5T280 376 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 SLFN12Q8IYM2 578 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 SEPT1Q8WYJ6 367 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 NAP1L4Q99733 375 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 HOOK1Q9UJC3 728 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 SBF1O95248 1867 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 FAM86B1E9PN63 330 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 PSAPP07602 524 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 FAM86B2P0C5J1 330 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 TMEM63BQ5T3F8 832 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 CABP7Q86V35 215 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SLC7A3Q8WY07 619 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 ATP6V0A1Q93050 837 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 PHF20Q9BVI0 1012 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.78□□□□□ -0.84
GGA3-202ENST00000538886 BCAS3Q9H6U6 928 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 ZNF302Q9NR11 478 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 INO80B-WBP1J3KQ70 363 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 POLR2DO15514 142 aaKnown RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 SLC37A4O43826 429 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 KIAA0753Q2KHM9 967 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SHCBP1Q8NEM2 672 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 TRAPPC12Q8WVT3 735 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 DYDC2Q96IM9 177 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 ZBED2Q9BTP6 218 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 TRIM6Q9C030 488 aaPredicted RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 SH3GLB2Q9NR46 395 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 DDX19AQ9NUU7 478 aaKnown RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 PTPN22Q9Y2R2 807 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 CSDE1O75534 798 aaKnown RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 FAM13AO94988 1023 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 TMOD1P28289 359 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SYKP43405 635 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 CCL23P55773 120 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 GABPB1Q06547 395 aaPredicted RBP9.78□□□□□ -0.84
GGA3-202ENST00000538886 HSDL1Q3SXM5 330 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 GOLGA6L1Q8N7Z2 621 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SPC24Q8NBT2 197 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 SYNPO2Q9UMS6 1093 aa9.78□□□□□ -0.84
GGA3-202ENST00000538886 TMEM150BA6NC51 233 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 WDR64B1ANS9 1081 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 FARP2O94887 1054 aaPredicted RBP9.77□□□□□ -0.84
GGA3-202ENST00000538886 RAG1P15918 1043 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 CPT1AP50416 773 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 OTUD6AQ7L8S5 288 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 VSIG10LQ86VR7 867 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 MORF4L1Q9UBU8 362 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 KCNG1Q9UIX4 513 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 MYH1P12882 1939 aa9.77□□□□□ -0.84
GGA3-202ENST00000538886 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 DCDC2CA8MYV0 355 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 H3BRB1 525 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 ADAMTS3O15072 1205 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 EVI5O60447 810 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 BMP15O95972 392 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 SMARCA1P28370 1054 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 NPEPPSP55786 919 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 ACTR2P61160 394 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 PPFIA1Q13136 1202 aa9.77□□□□□ -0.85
GGA3-202ENST00000538886 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms