RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RAD51AP2Q09MP3 1159 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 BMS1Q14692 1282 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 EPM2AIP1Q7L775 607 aaPredicted RBP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 JAKMIP2Q96AA8 810 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CCDC42Q96M95 316 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 DEFB129Q9H1M3 183 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 PSMD10O75832 226 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 LCA5LO95447 670 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ZSCAN20P17040 1043 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 VAV2P52735 878 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 PPP2R5CQ13362 524 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 SLC5A5Q92911 643 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 TUFT1Q9NNX1 390 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ARHGAP20Q9P2F6 1191 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 FAM184BQ9ULE4 1060 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 WNT10BO00744 389 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ZNF263O14978 683 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 CETN3O15182 167 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ASNSP08243 561 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ADAM9Q13443 819 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 SPA17Q15506 151 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 PDXDC1Q6P996 788 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 RRAGAQ7L523 313 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 KRT222Q8N1A0 295 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 PARD6BQ9BYG5 372 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 RGL1Q9NZL6 768 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
SLC28A1-204ENST00000538177 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 PLEKP08567 350 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 HOXD13P35453 343 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 PTGER2P43116 358 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 CASP5P51878 434 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 CYP4A11Q02928 519 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 KNOP1Q1ED39 458 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 CEP55Q53EZ4 464 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 PAPD7Q5XG87 772 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 LDHDQ86WU2 507 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 SYN2Q92777 582 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 TSGA10Q9BZW7 698 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 CEP72Q9P209 647 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 TFR2Q9UP52 801 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC28A1-204ENST00000538177 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 NOL4O94818 638 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 SLITRK3O94933 977 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 ERCC3P19447 782 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 MUTP22033 750 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 BAG6P46379 1132 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 KIF5AQ12840 1032 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 FBXO28Q9NVF7 368 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 PDXKO00764 312 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 GAP43P17677 238 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 KIF11P52732 1056 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 MSANTD4Q8NCY6 345 aa12.6□□□□□ -0.39
SLC28A1-204ENST00000538177 UBE2Q2Q8WVN8 375 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms