RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ATP2A2P16615 1042 aaKnown RBP24.48■■□□□ 1.51
CCDC78-215ENST00000538176 UTP14CQ5TAP6 766 aaKnown RBP24.48■■□□□ 1.51
CCDC78-215ENST00000538176 REXO1Q8N1G1 1221 aaKnown RBP24.48■■□□□ 1.51
CCDC78-215ENST00000538176 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 PDRG1Q9NUG6 133 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 SLC9A2Q9UBY0 812 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 PCDHA11Q9Y5I1 949 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 GRXCR1A8MXD5 290 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 KIF28PB7ZC32 967 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 CCT2P78371 535 aaKnown RBP24.47■■□□□ 1.51
CCDC78-215ENST00000538176 ARHGAP4P98171 946 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 SP4Q02446 784 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 TRIM71Q2Q1W2 868 aaKnown RBP24.47■■□□□ 1.51
CCDC78-215ENST00000538176 CNKSR3Q6P9H4 555 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 PHKBQ93100 1093 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 SLC26A6Q9BXS9 759 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 TANC1Q9C0D5 1861 aa24.47■■□□□ 1.51
CCDC78-215ENST00000538176 ABHD14A-ACY1A0A1B0GW23 586 aa24.46■■□□□ 1.51
CCDC78-215ENST00000538176 GSTTP1A0A1W2PQM5 241 aa24.46■■□□□ 1.51
CCDC78-215ENST00000538176 RPLP2P05387 115 aaKnown RBP24.46■■□□□ 1.51
CCDC78-215ENST00000538176 ZNF200P98182 395 aaPredicted RBP24.46■■□□□ 1.51
CCDC78-215ENST00000538176 SSRP1Q08945 709 aaKnown RBP24.46■■□□□ 1.51
CCDC78-215ENST00000538176 JAKMIP3Q5VZ66 844 aa24.46■■□□□ 1.51
CCDC78-215ENST00000538176 GLG1Q92896 1179 aa24.46■■□□□ 1.51
CCDC78-215ENST00000538176 AZI2Q9H6S1 392 aa24.46■■□□□ 1.51
CCDC78-215ENST00000538176 RSPH10B2B2RC85 870 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 RSPH10BP0C881 870 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 THPOP40225 353 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 PBX2P40425 430 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 KCNJ6P48051 423 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 ANKRD1Q15327 319 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 ZNF618Q5T7W0 954 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 SLC17A8Q8NDX2 589 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 C22orf23Q9BZE7 217 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 UPF3BQ9BZI7 483 aaKnown RBP24.45■■□□□ 1.5
CCDC78-215ENST00000538176 SETD4Q9NVD3 440 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 TMEM260Q9NX78 707 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 SCN5AQ14524 2016 aa24.45■■□□□ 1.5
CCDC78-215ENST00000538176 KAT6AQ92794 2004 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 TREHO43280 583 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 DEXIO95424 95 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 ADAM17P78536 824 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 SETQ01105 290 aaPredicted RBP24.44■■□□□ 1.5
CCDC78-215ENST00000538176 IKBKEQ14164 716 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 HIC1Q14526 733 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 TAF2Q6P1X5 1199 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 CYP2W1Q8TAV3 490 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 CRYGNQ8WXF5 182 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 PGBD1Q96JS3 809 aa24.44■■□□□ 1.5
CCDC78-215ENST00000538176 AGO4Q9HCK5 861 aaKnown RBP24.44■■□□□ 1.5
CCDC78-215ENST00000538176 DOCK5Q9H7D0 1870 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 NBNO60934 754 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 LGR5O75473 907 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 CDKL5O76039 1030 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 ARP10275 920 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 SLC26A2P50443 739 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 GPNMBQ14956 572 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 GALNT17Q6IS24 598 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 PLPPR4Q7Z2D5 763 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 RPAINQ86UA6 219 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 TRIM50Q86XT4 487 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 NCOA5Q9HCD5 579 aaKnown RBP24.43■■□□□ 1.5
CCDC78-215ENST00000538176 PKD2L1Q9P0L9 805 aa24.43■■□□□ 1.5
CCDC78-215ENST00000538176 RRN3P2A6NIE6 340 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 FOSL2P15408 326 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 GRIN2CQ14957 1233 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 TRAF7Q6Q0C0 670 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 RSPH3Q86UC2 560 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 PLA2G4DQ86XP0 818 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 GAS2L1Q99501 681 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-215ENST00000538176 TBC1D22BQ9NU19 505 aa24.42■■□□□ 1.5
CCDC78-215ENST00000538176 ATG7O95352 703 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 CIITAP33076 1130 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 USP11P51784 963 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 NLRP5P59047 1200 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 ACTR2P61160 394 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 PPFIA1Q13136 1202 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 LMBR1Q8WVP7 490 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 MYLIPQ8WY64 445 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 WNT8BQ93098 351 aa24.41■■□□□ 1.5
CCDC78-215ENST00000538176 FAM86B1E9PN63 330 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 FAM86B2P0C5J1 330 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 STAT5BP51692 787 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 HERC6Q8IVU3 1022 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 IL17RAQ96F46 866 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 SLKQ9H2G2 1235 aaPredicted RBP24.4■■□□□ 1.5
CCDC78-215ENST00000538176 NKX2-4Q9H2Z4 354 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 TCEAL9Q9UHQ7 104 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 TELO2Q9Y4R8 837 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 TET1Q8NFU7 2136 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 COL6A3P12111 3177 aa24.4■■□□□ 1.5
CCDC78-215ENST00000538176 IPO5O00410 1097 aaKnown RBP24.39■■□□□ 1.49
CCDC78-215ENST00000538176 ITGB3BPQ13352 177 aaPredicted RBP24.39■■□□□ 1.49
CCDC78-215ENST00000538176 FAM26DQ5JW98 314 aa24.39■■□□□ 1.49
CCDC78-215ENST00000538176 PPP2R2DQ66LE6 453 aa24.39■■□□□ 1.49
CCDC78-215ENST00000538176 VPS54Q9P1Q0 977 aa24.39■■□□□ 1.49
CCDC78-215ENST00000538176 YBX2Q9Y2T7 364 aaKnown RBP24.39■■□□□ 1.49
CCDC78-215ENST00000538176 IGLV3-22A0A075B6J6 115 aa24.38■■□□□ 1.49
CCDC78-215ENST00000538176 MBLAC1A4D2B0 266 aaPredicted RBP24.38■■□□□ 1.49
CCDC78-215ENST00000538176 XBP1P17861 261 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms