RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 DLEC1Q9Y238 1755 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 TTLL1O95922 423 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 GNA11P29992 359 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 MDH1P40925 334 aaKnown RBP15.35■□□□□ 0.05
LIG1-203ENST00000536218 SCTRP47872 440 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 NONOQ15233 471 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIG1-203ENST00000536218 TRIML1Q8N9V2 468 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 C3orf20Q8ND61 904 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 SPATA20Q8TB22 786 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 HOOK2Q96ED9 719 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 SMARCAL1Q9NZC9 954 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
LIG1-203ENST00000536218 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 DDTLA6NHG4 134 aaPredicted RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 CLTAP09496 248 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 NT5C2P49902 561 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 CDCA2Q69YH5 1023 aaPredicted RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 KDM7AQ6ZMT4 941 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 EHBP1Q8NDI1 1231 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 CTNND2Q9UQB3 1225 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 REXO2Q9Y3B8 237 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 MYH1P12882 1939 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 EPB41P11171 864 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 TECP42680 631 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 DRP2Q13474 957 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 ARL6IP4Q66PJ3 421 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 HHIPL2Q6UWX4 724 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 IFT81Q8WYA0 676 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 G3BP2Q9UN86 482 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 GUCY2FP51841 1108 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 EPHB4P54760 987 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 PDXDC2PQ6P474 469 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 MAATS1Q7Z4T9 603 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 REXO1Q8N1G1 1221 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 GSDMAQ96QA5 445 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 HAUS4Q9H6D7 363 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 TDRD3Q9H7E2 651 aaKnown RBP15.34■□□□□ 0.05
LIG1-203ENST00000536218 BATF3Q9NR55 127 aa15.34■□□□□ 0.05
LIG1-203ENST00000536218 SYNRGQ9UMZ2 1314 aa15.33■□□□□ 0.05
LIG1-203ENST00000536218 ATP6V1G2O95670 118 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 IFFO1Q0D2I5 559 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 UBE2SQ16763 222 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 ZNF513Q8N8E2 541 aaPredicted RBP15.33■□□□□ 0.04
LIG1-203ENST00000536218 MAGEC3Q8TD91 643 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 NUP58Q9BVL2 599 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 GDAQ9Y2T3 454 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
LIG1-203ENST00000536218 ANP32DO95626 131 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 TXKP42681 527 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 SPATA1Q5VX52 437 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
LIG1-203ENST00000536218 GALNT17Q6IS24 598 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
LIG1-203ENST00000536218 KRT25Q7Z3Z0 450 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 ADGRF4Q8IZF3 695 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 TAB2Q9NYJ8 693 aa15.33■□□□□ 0.04
LIG1-203ENST00000536218 GDF11O95390 407 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 TNNI2P48788 182 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 TSR1Q2NL82 804 aaKnown RBP15.32■□□□□ 0.04
LIG1-203ENST00000536218 GNPTABQ3T906 1256 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 C6orf89Q6UWU4 347 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 NEK8Q86SG6 692 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 DAGLBQ8NCG7 672 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 CUL5Q93034 780 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 CTAGE1Q96RT6 745 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 FAM167BQ9BTA0 163 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 DISC1Q9NRI5 854 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 PPP1R3GB7ZBB8 358 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 USP17L10C9JJH3 530 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 CXCR5P32302 372 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 RAB27AP51159 221 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 EEF2KMTQ96G04 330 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 RIOX1Q9H6W3 641 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 ESYT3A0FGR9 886 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 ZNF233A6NK53 670 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
LIG1-203ENST00000536218 SNAP25P60880 206 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 QPCTQ16769 361 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 RPUSD2Q8IZ73 545 aaKnown RBP15.32■□□□□ 0.04
LIG1-203ENST00000536218 HVCN1Q96D96 273 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 PAGR1Q9BTK6 254 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 JMJD4Q9H9V9 463 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 EHD2Q9NZN4 543 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 SWAP70Q9UH65 585 aa15.32■□□□□ 0.04
LIG1-203ENST00000536218 PPIP5K2O43314 1243 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
LIG1-203ENST00000536218 RPN1P04843 607 aaKnown RBP15.31■□□□□ 0.04
LIG1-203ENST00000536218 PBX1P40424 430 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 ZNF543Q08ER8 600 aa15.31■□□□□ 0.04
LIG1-203ENST00000536218 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms