RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LSM14BQ9BX40 385 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 DMGDHQ9UI17 866 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 G3V3G9 751 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 MED24O75448 989 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 NAB2Q15742 525 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 CDC37Q16543 378 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 SLC18A3Q16572 532 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 CFAP221Q4G0U5 840 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 DNAJC18Q9H819 358 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 PI4KBQ9UBF8 816 aa17.66■□□□□ 0.42
CHMP1A-202ENST00000535997 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 NPHP3-ACAD11A0A0J9YXS1 232 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 NPR1P16066 1061 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 CXCR5P32302 372 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 GGCXP38435 758 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 CRKP46108 304 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 NAP1L1P55209 391 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 CERKLQ49MI3 558 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 CATSPER3Q86XQ3 398 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 GDAP1L1Q96MZ0 367 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 DNM3Q9UQ16 869 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 RPA1P27694 616 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 SPIRE1Q08AE8 756 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 KCNH2Q12809 1159 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 Q4G0T1 1027 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 PODNQ7Z5L7 613 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 ETNPPLQ8TBG4 499 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 TBC1D5Q92609 795 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 AMNQ9BXJ7 453 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 STIM2Q9P246 746 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
CHMP1A-202ENST00000535997 AGPSO00116 658 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 BUB1O43683 1085 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 RAD21O60216 631 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 FOSP01100 380 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 EPS15P42566 896 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 FRMD5Q7Z6J6 570 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 SYT2Q8N9I0 419 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 GOLGA6BA6NDN3 693 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 STAT3P40763 770 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 GIT2Q14161 759 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 EMBQ6PCB8 327 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 GSPT2Q8IYD1 628 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM20AQ96MK3 541 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 PSMB7Q99436 277 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 ATAD5Q96QE3 1844 aa17.64■□□□□ 0.41
CHMP1A-202ENST00000535997 NCK2O43639 380 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 NR2F2P24468 414 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 TNFRSF8P28908 595 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 MATR3P43243 847 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 KLHL30Q0D2K2 578 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 PRR16Q569H4 304 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 C10orf76Q5T2E6 689 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 TATDN1Q6P1N9 297 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 GPIHBP1Q8IV16 184 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 PCDHGC5Q9Y5F6 944 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 POTEFA5A3E0 1075 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 SPATA31C1P0DKV0 1188 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 EPHB4P54760 987 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 KNOP1Q1ED39 458 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 POTEGQ6S5H5 508 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 POTEEQ6S8J3 1075 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 GANQ9H2C0 597 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 PLCB1Q9NQ66 1216 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 BZW2Q9Y6E2 419 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-202ENST00000535997 A0A087X0T9 212 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 PDXKO00764 312 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM228BP0C875 321 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 KIAA0753Q2KHM9 967 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 KCTD17Q8N5Z5 321 aa17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 ARMCX3Q9UH62 379 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-202ENST00000535997 DDTLA6NHG4 134 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 SPDYE3A6NKU9 549 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 F5H6K3 240 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 PALMO75781 387 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 KLRC1P26715 233 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms