RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 POLR3CQ9BUI4 534 aaPredicted RBP18.26■□□□□ 0.51
VAMP1-205ENST00000535927 NT5C3AQ9H0P0 336 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
VAMP1-205ENST00000535927 PSAPP07602 524 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 RARBP10826 455 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
VAMP1-205ENST00000535927 ELNP15502 786 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 SMPD1P17405 629 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 SLC26A2P50443 739 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 SLC9C1Q4G0N8 1177 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 MIER3Q7Z3K6 550 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
VAMP1-205ENST00000535927 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 CCDC39Q9UFE4 941 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 USP25Q9UHP3 1055 aa18.25■□□□□ 0.51
VAMP1-205ENST00000535927 KDM3AQ9Y4C1 1321 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 A6NJR5 290 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 NOP56O00567 594 aaKnown RBP18.24■□□□□ 0.51
VAMP1-205ENST00000535927 ZEB2O60315 1214 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 ARIH2O95376 493 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 INHAP05111 366 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 HOXD8P13378 290 aaPredicted RBP18.24■□□□□ 0.51
VAMP1-205ENST00000535927 RPA1P27694 616 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 CPT1AP50416 773 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 ARHGAP1Q07960 439 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 IL17AQ16552 155 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 RESP18Q5W5W9 173 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 CALML4Q96GE6 196 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 CCDC34Q96HJ3 373 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 CSRNP2Q9H175 543 aa18.24■□□□□ 0.51
VAMP1-205ENST00000535927 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
VAMP1-205ENST00000535927 MYH9P35579 1960 aaKnown RBP18.23■□□□□ 0.51
VAMP1-205ENST00000535927 IGKV6D-21A0A0A0MT36 114 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 GJA9P57773 515 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 ACTR2P61160 394 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 HYIQ5T013 277 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 FAM160B1Q5W0V3 765 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 ABHD15Q6UXT9 468 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 ATP6V0A1Q93050 837 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 ARMC5Q96C12 935 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 SPATA33Q96N06 139 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 HSD17B14Q9BPX1 270 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 UNC45AQ9H3U1 944 aa18.23■□□□□ 0.51
VAMP1-205ENST00000535927 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
VAMP1-205ENST00000535927 LYPLA2O95372 231 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 CNGA1P29973 690 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 MCM4P33991 863 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 DGKDQ16760 1214 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 CCDC73Q6ZRK6 1079 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 PLPPR4Q7Z2D5 763 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 TLK2Q86UE8 772 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 OR6J1Q8NGC5 347 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 AFAP1L1Q8TED9 768 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 MRPS27Q92552 414 aaKnown RBP18.22■□□□□ 0.51
VAMP1-205ENST00000535927 GPR20Q99678 358 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 CUEDC2Q9H467 287 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 AZI2Q9H6S1 392 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 PPME1Q9Y570 386 aa18.22■□□□□ 0.51
VAMP1-205ENST00000535927 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
VAMP1-205ENST00000535927 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 LGR5O75473 907 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 SUPT20HL2P0C7V6 817 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 QARSP47897 775 aaKnown RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 PSMC5P62195 406 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 NCAPH2Q6IBW4 605 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 CABP7Q86V35 215 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 C4orf19Q8IY42 314 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 TSEN34Q9BSV6 310 aaKnown RBP18.21■□□□□ 0.51
VAMP1-205ENST00000535927 SEZ6LQ9BYH1 1024 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 EMSYQ7Z589 1322 aa18.21■□□□□ 0.51
VAMP1-205ENST00000535927 WDR81Q562E7 1941 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 LOXHD1Q8IVV2 1947 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
VAMP1-205ENST00000535927 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 MBD3O95983 291 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 CCNE2O96020 404 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 SHC4Q6S5L8 630 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 IQUBQ8NA54 791 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 CDK5RAP3Q96JB5 506 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 FAM167AQ96KS9 214 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 CLIC6Q96NY7 704 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 NACC1Q96RE7 527 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms