RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ARFGAP3Q9NP61 516 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 ZNHIT6Q9NWK9 470 aaKnown RBP14.81□□□□□ -0.04
VPS33B-202ENST00000535906 GUCA1BQ9UMX6 200 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 COL4A3BPQ9Y5P4 624 aa14.81□□□□□ -0.04
VPS33B-202ENST00000535906 GCOM1H8Y6P7 765 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-202ENST00000535906 TBC1D8O95759 1140 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 POLR2MP0CAP2 368 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 CASP5P51878 434 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 EIF2AK1Q9BQI3 630 aaKnown RBP14.8□□□□□ -0.04
VPS33B-202ENST00000535906 MMRN2Q9H8L6 949 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 MAP3K10Q02779 954 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 TRAF1Q13077 416 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
VPS33B-202ENST00000535906 SLC16A10Q8TF71 515 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-202ENST00000535906 REEP2Q9BRK0 252 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 MYOZ2Q9NPC6 264 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 PLAGL2Q9UPG8 496 aa14.8□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC151A5D8V7 595 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 PLA2G6O60733 806 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 TFRCP02786 760 aaKnown RBP14.79□□□□□ -0.04
VPS33B-202ENST00000535906 PLEKP08567 350 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-202ENST00000535906 BHMT2Q9H2M3 363 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 ZSWIM4Q9H7M6 989 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 PIM2Q9P1W9 311 aa14.79□□□□□ -0.04
VPS33B-202ENST00000535906 PUF60Q9UHX1 559 aaKnown RBP14.79□□□□□ -0.04
VPS33B-202ENST00000535906 RCCD1A6NED2 376 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 SASH3O75995 380 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 EGFRP00533 1210 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 ASNSP08243 561 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CYLC1P35663 651 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CDK17Q00537 523 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 BRD3Q15059 726 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC40Q4G0X9 1142 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 OTOP1Q7RTM1 612 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 FAM160B2Q86V87 743 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 LDHDQ86WU2 507 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC170Q8IYT3 715 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 IQCDQ96DY2 449 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 POLR3CQ9BUI4 534 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-202ENST00000535906 UBXN6Q9BZV1 441 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 BCAS3Q9H6U6 928 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 MRPL11Q9Y3B7 192 aaKnown RBP14.78□□□□□ -0.04
VPS33B-202ENST00000535906 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 PSMD10O75832 226 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 HNRNPH3P31942 346 aaKnown RBP14.78□□□□□ -0.04
VPS33B-202ENST00000535906 KRT83P78385 493 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 WHAMMP3Q1A5X7 153 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CCDC122Q5T0U0 273 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 CIAPIN1Q6FI81 312 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-202ENST00000535906 HSD17B14Q9BPX1 270 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 LACRTQ9GZZ8 138 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
VPS33B-202ENST00000535906 PHF20L1A8MW92 1017 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 RSPH10B2B2RC85 870 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 EIF3CLB5ME19 914 aaKnown RBP14.77□□□□□ -0.04
VPS33B-202ENST00000535906 RSPH10BP0C881 870 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 INPP5BP32019 993 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 CYP27A1Q02318 531 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 CTTNQ14247 550 aaKnown RBP14.77□□□□□ -0.04
VPS33B-202ENST00000535906 RASA3Q14644 834 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 LRCH2Q5VUJ6 765 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 EIF3CQ99613 913 aaKnown RBP14.77□□□□□ -0.04
VPS33B-202ENST00000535906 RUSC1Q9BVN2 902 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 ANKZF1Q9H8Y5 726 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 ARHGAP20Q9P2F6 1191 aa14.77□□□□□ -0.04
VPS33B-202ENST00000535906 ZNF263O14978 683 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 CHMP2AO43633 222 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 SLITRK3O94933 977 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 HOXD13P35453 343 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 ADAM9Q13443 819 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 ZNF662Q6ZS27 426 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 TEX2Q8IWB9 1127 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 TRIM59Q8IWR1 403 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 MSANTD4Q8NCY6 345 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 PIGOQ8TEQ8 1089 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 BAP1Q92560 729 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 AGBL1Q96MI9 1066 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 RAB21Q9UL25 225 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.05
VPS33B-202ENST00000535906 LRRC53A6NM62 1247 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 ZBTB39O15060 712 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 ZBTB7AO95365 584 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 EYA4O95677 639 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 PTGER2P43116 358 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 MARSP56192 900 aaKnown RBP14.76□□□□□ -0.05
VPS33B-202ENST00000535906 AMPD2Q01433 879 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 CEP55Q53EZ4 464 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 RRAGAQ7L523 313 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms