RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 PCDHA11Q9Y5I1 949 aa12.4□□□□□ -0.42
CCDC60-202ENST00000535685 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.43
CCDC60-202ENST00000535685 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
CCDC60-202ENST00000535685 H3BRB1 525 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 TRIM66O15016 1216 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 LGALS2P05162 132 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 CKBP12277 381 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 PBX2P40425 430 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 RTN1Q16799 776 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 SERINC5Q86VE9 423 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
CCDC60-202ENST00000535685 MYLIPQ8WY64 445 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 GPR20Q99678 358 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
CCDC60-202ENST00000535685 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-202ENST00000535685 UBIAD1Q9Y5Z9 338 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 NID2Q14112 1375 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
CCDC60-202ENST00000535685 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 MYH9P35579 1960 aaKnown RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 CAND2O75155 1236 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 REC8O95072 547 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 FOSL2P15408 326 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 KCNA2P16389 499 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 LRRC8DQ7L1W4 858 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 DEFB128Q7Z7B8 93 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 BCAS3Q9H6U6 928 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 RIC8AQ9NPQ8 531 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 PCDHA6Q9UN73 950 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
CCDC60-202ENST00000535685 PCDHA8Q9Y5H6 950 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 SNX14Q9Y5W7 946 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
CCDC60-202ENST00000535685 KLF18A0A0U1RQI7 1052 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 EFCAB14O75071 495 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 ITGB5P18084 799 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 EVCP57679 992 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 ADAM17P78536 824 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 HIC1Q14526 733 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 CCDC82Q8N4S0 544 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
CCDC60-202ENST00000535685 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
CCDC60-202ENST00000535685 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 hCG_1642624A0A1W2PR95 340 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 C17orf102A2RUQ5 167 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 GOLGA8AA7E2F4 631 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 GOLGA8BA8MQT2 603 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 STXBP3O00186 592 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 NBNO60934 754 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 ATP9AO75110 1047 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 SMIM10L2AP0DMW4 78 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 SMIM10L2BP0DMW5 78 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 GNAT1P11488 350 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 PSMA5P28066 241 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 CDC27P30260 824 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
CCDC60-202ENST00000535685 CHMP4BP1P59074 171 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 AP3B2Q13367 1082 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 ERICH6BQ5W0A0 696 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 HEATR3Q7Z4Q2 680 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC60-202ENST00000535685 SEPT1Q8WYJ6 367 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 WNT8BQ93098 351 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC60-202ENST00000535685 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 RNPEPQ9H4A4 650 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
CCDC60-202ENST00000535685 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
CCDC60-202ENST00000535685 SORBS3O60504 671 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 POU3F3P20264 500 aaPredicted RBP12.35□□□□□ -0.43
CCDC60-202ENST00000535685 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
CCDC60-202ENST00000535685 NAPAP54920 295 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms