RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 ASPRV1Q53RT3 343 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 PIGBQ92521 554 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 SEMA3EO15041 775 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 LMNB1P20700 586 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 RAPGEF5Q92565 580 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 NLRP4Q96MN2 994 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 ZWILCHQ9H900 591 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 IPO11Q9UI26 975 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 TCP11X2Q5H9J9 407 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 FAM49AQ9H0Q0 323 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 GCNT4Q9P109 453 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 CASP1P29466 404 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 P2RX5Q93086 422 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
SPG11-203ENST00000535302 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 ORC6Q9Y5N6 252 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 NMT2O60551 498 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 DAB2P98082 770 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 CIAO1O76071 339 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
SPG11-203ENST00000535302 MYL3P08590 195 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 DARS2Q6PI48 645 aaKnown RBP13.65□□□□□ -0.22
SPG11-203ENST00000535302 RAB44Q7Z6P3 723 aaPredicted RBP13.65□□□□□ -0.22
SPG11-203ENST00000535302 NUDCD3Q8IVD9 361 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 PIGOQ8TEQ8 1089 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 MAML1Q92585 1016 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 AP1M1Q9BXS5 423 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 RASGRF1Q13972 1273 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 OR6B2Q6IFH4 312 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 GALNT17Q6IS24 598 aa13.65□□□□□ -0.22
SPG11-203ENST00000535302 MYO1FO00160 1098 aa13.65□□□□□ -0.23
SPG11-203ENST00000535302 CPP00450 1065 aa13.65□□□□□ -0.23
SPG11-203ENST00000535302 MMP1P03956 469 aa13.65□□□□□ -0.23
SPG11-203ENST00000535302 PLCG1P19174 1290 aa13.65□□□□□ -0.23
SPG11-203ENST00000535302 ZNF449Q6P9G9 518 aa13.65□□□□□ -0.23
SPG11-203ENST00000535302 IL6STP40189 918 aaPredicted RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 KIF11P52732 1056 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 PLTPP55058 493 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 SLC39A14Q15043 492 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 HEXIM2Q96MH2 286 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 EPB41L5Q9HCM4 733 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 ZNF394Q53GI3 561 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 KRT10P13645 584 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 VCPP55072 806 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 EPHB1P54762 984 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 SARS2Q9NP81 518 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 ATP6V0A1Q93050 837 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 GOLGA8KD6RF30 607 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 CDK8P49336 464 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 THOC5Q13769 683 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 CAPRIN1Q14444 709 aaKnown RBP13.64□□□□□ -0.23
SPG11-203ENST00000535302 TBCCQ15814 346 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
SPG11-203ENST00000535302 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 POLE2P56282 527 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 RBM6P78332 1123 aaKnown RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 CEP19Q96LK0 163 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 NPC1L1Q9UHC9 1359 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 HADHAP40939 763 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 PPP1R36Q96LQ0 422 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 HEXIM1O94992 359 aaKnown RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 SGO2Q562F6 1265 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms