RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 TRAF1Q13077 416 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 NEDD9Q14511 834 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 CTC1Q2NKJ3 1217 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 CYFIP1Q7L576 1253 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 FIBCD1Q8N539 461 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 PIGSQ96S52 555 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 GPR20Q99678 358 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 LMAN2LQ9H0V9 348 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
TTC39A-218ENST00000534098 TRIOO75962 3097 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 ADGRA3Q8IWK6 1321 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 GRM6O15303 877 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 NCK2O43639 380 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 CYTH3O43739 400 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 STAM2O75886 525 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 RB1P06400 928 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 BMPR1AP36894 532 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 DLX2Q07687 328 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-218ENST00000534098 HYAL1Q12794 435 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 GRM4Q14833 912 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
TTC39A-218ENST00000534098 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-218ENST00000534098 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-218ENST00000534098 TELO2Q9Y4R8 837 aa13.5□□□□□ -0.25
TTC39A-218ENST00000534098 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 HIP1O00291 1037 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 FIBPO43427 364 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 MBTPS2O43462 519 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 CHRNA1P02708 482 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 CLP1Q92989 425 aaKnown RBP13.49□□□□□ -0.25
TTC39A-218ENST00000534098 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
TTC39A-218ENST00000534098 IL25Q9H293 177 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
TTC39A-218ENST00000534098 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
TTC39A-218ENST00000534098 WDFY4Q6ZS81 3184 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 NRCAMQ92823 1304 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 TBX10O75333 385 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 GHRP10912 638 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 MGAT3Q09327 533 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 CLUL1Q15846 466 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
TTC39A-218ENST00000534098 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
TTC39A-218ENST00000534098 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 RUFY4Q6ZNE9 571 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 CHD1LQ86WJ1 897 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
TTC39A-218ENST00000534098 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
TTC39A-218ENST00000534098 SENP7Q9BQF6 1050 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
TTC39A-218ENST00000534098 MMP1P03956 469 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
TTC39A-218ENST00000534098 SP4Q02446 784 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
TTC39A-218ENST00000534098 LPIN1Q14693 890 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 TAF2Q6P1X5 1199 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
TTC39A-218ENST00000534098 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 ENPP3O14638 875 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 LINC01565O15544 149 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 NUCB1Q02818 461 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 TROAPQ12815 778 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 CAMK1Q14012 370 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 BTG3Q14201 252 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-218ENST00000534098 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 RNF135Q8IUD6 432 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 PLVAPQ9BX97 442 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
TTC39A-218ENST00000534098 FNDC1Q4ZHG4 1894 aaPredicted RBP13.46□□□□□ -0.26
TTC39A-218ENST00000534098 MBLAC1A4D2B0 266 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-218ENST00000534098 IFIT3O14879 490 aaKnown RBP13.45□□□□□ -0.26
TTC39A-218ENST00000534098 DGKIO75912 1065 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 CSPG5O95196 566 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-218ENST00000534098 TRDNQ13061 729 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 PPFIA1Q13136 1202 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 ADAM15Q13444 863 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 FBXO47Q5MNV8 452 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 XRRA1Q6P2D8 792 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 P2RX5Q93086 422 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 MSLNLQ96KJ4 702 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-218ENST00000534098 IGFLR1Q9H665 355 aa13.45□□□□□ -0.26
TTC39A-218ENST00000534098 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
TTC39A-218ENST00000534098 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms