RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 BLOC1S3Q6QNY0 202 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 SLC30A10Q6XR72 485 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 RBM23Q86U06 439 aaKnown RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 GPIHBP1Q8IV16 184 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 CHURC1Q8WUH1 139 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 CEP95Q96GE4 821 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 ALG1Q9BT22 464 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 KATNAL1Q9BW62 490 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 SMOC2Q9H3U7 446 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 MKNK2Q9HBH9 465 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 ARPP21Q9UBL0 812 aaPredicted RBP7.67□□□□□ -1.18
CD44-237ENST00000534082 PLAGL2Q9UPG8 496 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 MYH4Q9Y623 1939 aa7.67□□□□□ -1.18
CD44-237ENST00000534082 FASNP49327 2511 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 PTPDC1A2A3K4 754 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 GOLIM4O00461 696 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 NFIBO00712 420 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 TTLL1O95922 423 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 F2P00734 622 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 CTSHP09668 335 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 ZNF286BP0CG31 522 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 CASTP20810 708 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 CALML3P27482 149 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 ARHGAP1Q07960 439 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 KIAA0753Q2KHM9 967 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 SLFNL1Q499Z3 407 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 CCDC105Q8IYK2 499 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 FLCNQ8NFG4 579 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 CYP2W1Q8TAV3 490 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 STAG1Q8WVM7 1258 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 MKL1Q969V6 931 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 CHMP4CQ96CF2 233 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 MPHOSPH6Q99547 160 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 HAUS7Q99871 368 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 PRKD2Q9BZL6 878 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 RC3H2Q9HBD1 1191 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
CD44-237ENST00000534082 MTMR4Q9NYA4 1195 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 SLC4A4Q9Y6R1 1079 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 R4GN57 208 aa7.66□□□□□ -1.18
CD44-237ENST00000534082 GH1P01241 217 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 ICAM1P05362 532 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 ITGB1P05556 798 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 AOC1P19801 751 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 ADD2P35612 726 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 SLC1A4P43007 532 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 BTG3Q14201 252 aaPredicted RBP7.65□□□□□ -1.18
CD44-237ENST00000534082 DGKDQ16760 1214 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 CCDC62Q6P9F0 684 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 CHST3Q7LGC8 479 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 METTL3Q86U44 580 aaKnown RBP7.65□□□□□ -1.18
CD44-237ENST00000534082 AACSQ86V21 672 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 SERINC5Q86VE9 423 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
CD44-237ENST00000534082 DTWD2Q8NBA8 298 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 VN1R2Q8NFZ6 395 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 SSH3Q8TE77 659 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 POF1BQ8WVV4 589 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 RUBCNQ92622 972 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 APBB2Q92870 758 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 P2RX5Q93086 422 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 DNAJC2Q99543 621 aaKnown RBP7.65□□□□□ -1.18
CD44-237ENST00000534082 OSBPL7Q9BZF2 842 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 PRR12Q9ULL5 1215 aa7.65□□□□□ -1.18
CD44-237ENST00000534082 GPR179Q6PRD1 2367 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 PLIN4Q96Q06 1357 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 HAS3O00219 553 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 GPR37O15354 613 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 PLA2G6O60733 806 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 BCAR3O75815 825 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 MCCP23508 829 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 GGCXP38435 758 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 LY6KQ17RY6 165 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 KIAA0319Q5VV43 1072 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 KCTD1Q719H9 257 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 RASGRP2Q7LDG7 609 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 DCLK2Q8N568 766 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 SPPL3Q8TCT6 385 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 ATP8B4Q8TF62 1192 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 CHAMP1Q96JM3 812 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 TLE6Q9H808 572 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 NOP58Q9Y2X3 529 aaKnown RBP7.64□□□□□ -1.19
CD44-237ENST00000534082 NR2E1Q9Y466 385 aa7.64□□□□□ -1.19
CD44-237ENST00000534082 MRPL42Q9Y6G3 142 aaKnown RBP7.64□□□□□ -1.19
CD44-237ENST00000534082 FSD2A1L4K1 749 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 MINDY4BA8MYZ0 360 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 C2CD4DB7Z1M9 353 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
CD44-237ENST00000534082 PER2O15055 1255 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 PI15O43692 258 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 CAND2O75155 1236 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 PRDM1O75626 825 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms