RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 HAS3O00219 553 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 BACH1O14867 736 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 CSF2RAP15509 400 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 KRT2P35908 639 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 ACTR2P61160 394 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 ITGB3BPQ13352 177 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-227ENST00000533909 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
CAPN1-227ENST00000533909 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-227ENST00000533909 CRYGNQ8WXF5 182 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 TNPO1Q92973 898 aaKnown RBP15.18■□□□□ 0.02
CAPN1-227ENST00000533909 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 ERAP1Q9NZ08 941 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 DOCK5Q9H7D0 1870 aa15.18■□□□□ 0.02
CAPN1-227ENST00000533909 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 MARK3P27448 753 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 CIITAP33076 1130 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 HMGN5P82970 282 aaKnown RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 INF2Q27J81 1249 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 FAM160B1Q5W0V3 765 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 ATP6V0A1Q93050 837 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 NAP1L4Q99733 375 aaKnown RBP15.17■□□□□ 0.02
CAPN1-227ENST00000533909 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
CAPN1-227ENST00000533909 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 MARCH6O60337 910 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 MCM2P49736 904 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
CAPN1-227ENST00000533909 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 MIS18BP1Q6P0N0 1132 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 MTIF3Q9H2K0 278 aaKnown RBP15.16■□□□□ 0.02
CAPN1-227ENST00000533909 IL23AQ9NPF7 189 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 TELO2Q9Y4R8 837 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
CAPN1-227ENST00000533909 M0R2N6 131 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 GAS7O60861 476 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 RFC2P35250 354 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 KRT76Q01546 638 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 PPFIA1Q13136 1202 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 PTK7Q13308 1070 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 SHHQ15465 462 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 NPY5RQ15761 445 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 CKAP2LQ8IYA6 745 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 SCLYQ96I15 445 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 SETD4Q9NVD3 440 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 DDX25Q9UHL0 483 aaKnown RBP15.15■□□□□ 0.02
CAPN1-227ENST00000533909 NRCAMQ92823 1304 aa15.15■□□□□ 0.02
CAPN1-227ENST00000533909 MSH4O15457 936 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 CCNT1O60563 726 aaKnown RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 TDP2O95551 362 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 MMP1P03956 469 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 PSAPP07602 524 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 ACRP10323 421 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 SELPP16109 830 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 THPOP40225 353 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 SLC26A2P50443 739 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 STAT5BP51692 787 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 EPHB4P54760 987 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 LRIT3Q3SXY7 679 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 Q4G0T1 1027 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 KRT40Q6A162 431 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 SMAP1Q8IYB5 467 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 FTOQ9C0B1 505 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN1-227ENST00000533909 WNT8AQ9H1J5 351 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 RNPEPQ9H4A4 650 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
CAPN1-227ENST00000533909 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 WDR64B1ANS9 1081 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 CHMP2AO43633 222 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 LGR5O75473 907 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 CCNE2O96020 404 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 FGBP02675 491 aa15.13■□□□□ 0.01
CAPN1-227ENST00000533909 PFKMP08237 780 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms