RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PRKCIP41743 596 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 TIMM10P62072 90 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 DR1Q01658 176 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ZNF572Q7Z3I7 529 aaPredicted RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 SPATA21Q7Z572 469 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 CCDC82Q8N4S0 544 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ZNF483Q8TF39 744 aaPredicted RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 ARHGEF2Q92974 986 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 TRAPPC9Q96Q05 1148 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 CNPY3Q9BT09 278 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ZHX3Q9H4I2 956 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ZNF446Q9NWS9 450 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 CORO1CQ9ULV4 474 aaPredicted RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 SUFUQ9UMX1 484 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 PTPRMP28827 1452 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 SMIM24O75264 130 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 HAUS5O94927 633 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ANXA1P04083 346 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 TSPY3P0CV98 308 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 TSPY8P0CW00 308 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 MYL4P12829 197 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 SLC1A1P43005 524 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 NAALADL2Q58DX5 795 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 KRT28Q7Z3Y7 464 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 SETD3Q86TU7 594 aaPredicted RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 SRBD1Q8N5C6 995 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 JADE3Q92613 823 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ATP2A3Q93084 1043 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 WDR11Q9BZH6 1224 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 TMEM206Q9H813 350 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 SLC40A1Q9NP59 571 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 PLAAQ9Y263 795 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 PCDHGC5Q9Y5F6 944 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 VGLL3A8MV65 326 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 AP5Z1O43299 807 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 GYPCP04921 128 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 MYBL1P10243 752 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 HSPA8P11142 646 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 EHHADHQ08426 723 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 XRCC4Q13426 336 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 FRMD5Q7Z6J6 570 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ZSCAN29Q8IWY8 852 aaPredicted RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 POP5Q969H6 163 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 RBM41Q96IZ5 413 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 NLRP3Q96P20 1036 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 SERPINB12Q96P63 405 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 TIPINQ9BVW5 301 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 MRPL47Q9HD33 250 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 SEPT11Q9NVA2 429 aaKnown RBP4.39□□□□□ -1.71
SOX6-217ENST00000533870 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
SOX6-217ENST00000533870 ATP5J2-PTCD1G3V325 749 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 PTCD1O75127 700 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 TTKP33981 857 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 KPNA2P52292 529 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 ROR2Q01974 943 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 ADAM9Q13443 819 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ZNF449Q6P9G9 518 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 KRT26Q7Z3Y9 468 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 DPF2Q92785 391 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CEP95Q96GE4 821 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 FAM20AQ96MK3 541 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 PHF20Q9BVI0 1012 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 WWP1Q9H0M0 922 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 MMADHCQ9H3L0 296 aaPredicted RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 TLR7Q9NYK1 1049 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 PPP1R9AQ9ULJ8 1098 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 C15orf41Q9Y2V0 281 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CLTCL1P53675 1640 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 NID2Q14112 1375 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 STK10O94804 968 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 GZMAP12544 262 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
SOX6-217ENST00000533870 E2F4Q16254 413 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CMPK2Q5EBM0 449 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CENPPQ6IPU0 288 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 C4orf22Q6V702 233 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 NOA1Q8NC60 698 aaKnown RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CHAMP1Q96JM3 812 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 DCLRE1BQ9H816 532 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 KBTBD4Q9NVX7 518 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 PACSIN2Q9UNF0 486 aaPredicted RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 STX8Q9UNK0 236 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.38□□□□□ -1.71
SOX6-217ENST00000533870 SHROOM2Q13796 1616 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 PBRM1Q86U86 1689 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 G3V3G9 751 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 MAP3K7O43318 606 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 CLTAP09496 248 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ITGA6P23229 1130 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 TNNI2P48788 182 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ESRRGP62508 458 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 KIAA1755Q5JYT7 1200 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 DCAF8Q5TAQ9 597 aa4.38□□□□□ -1.71
SOX6-217ENST00000533870 ATG16L1Q676U5 607 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms