RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 POLA2Q14181 598 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 FAM26DQ5JW98 314 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 USTQ9Y2C2 406 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 MAST4O15021 2626 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 GREB1LQ9C091 1923 aaPredicted RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 SLC30A4O14863 429 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 SPTLC1O15269 473 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 TGM1P22735 817 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 PLPP4Q5VZY2 271 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 CASP10Q92851 521 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
CSDE1-215ENST00000533818 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
CSDE1-215ENST00000533818 TMEM260Q9NX78 707 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 ZMIZ1Q9ULJ6 1067 aa12.48□□□□□ -0.41
CSDE1-215ENST00000533818 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 FSCN2O14926 492 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 PRDM1O75626 825 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 BCAR3O75815 825 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 FGF18O76093 207 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 EOMESO95936 686 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SMIM10L2AP0DMW4 78 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SMIM10L2BP0DMW5 78 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 PMLP29590 882 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 HOXC8P31273 242 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 ADD2P35612 726 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SHC2P98077 582 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SBK1Q52WX2 424 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SPOUT1Q5T280 376 aaKnown RBP12.47□□□□□ -0.41
CSDE1-215ENST00000533818 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 RUFY4Q6ZNE9 571 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 AACSQ86V21 672 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 NETO1Q8TDF5 533 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 RNPEPQ9H4A4 650 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 TBC1D17Q9HA65 648 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
CSDE1-215ENST00000533818 CHRNA1P02708 482 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 CFHP08603 1231 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 HOXD8P13378 290 aaPredicted RBP12.46□□□□□ -0.41
CSDE1-215ENST00000533818 RARSP54136 660 aaKnown RBP12.46□□□□□ -0.41
CSDE1-215ENST00000533818 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 NPAS4Q8IUM7 802 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 THNSL1Q8IYQ7 743 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 SSH3Q8TE77 659 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 ATRIPQ8WXE1 791 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 ACSF2Q96CM8 615 aaPredicted RBP12.46□□□□□ -0.41
CSDE1-215ENST00000533818 C16orf70Q9BSU1 422 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 KCNK12Q9HB15 430 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 DLGAP2Q9P1A6 1054 aa12.46□□□□□ -0.41
CSDE1-215ENST00000533818 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
CSDE1-215ENST00000533818 POTEMA6NI47 508 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 HIDE1A8MVS5 230 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 H3BRB1 525 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 SORBS3O60504 671 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 STAG3L1P0CL83 205 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 TSPY3P0CV98 308 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 TSPY8P0CW00 308 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 GNAT1P11488 350 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 SLC16A2P36021 539 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 GATMP50440 423 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 LPIN1Q14693 890 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 STXBP2Q15833 593 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 RARS2Q5T160 578 aaKnown RBP12.45□□□□□ -0.42
CSDE1-215ENST00000533818 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
CSDE1-215ENST00000533818 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 SPATA33Q96N06 139 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 TCF25Q9BQ70 676 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 TUT1Q9H6E5 874 aaKnown RBP12.45□□□□□ -0.42
CSDE1-215ENST00000533818 ENTPD7Q9NQZ7 604 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 CA14Q9ULX7 337 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 MTMR7Q9Y216 660 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 NOP58Q9Y2X3 529 aaKnown RBP12.45□□□□□ -0.42
CSDE1-215ENST00000533818 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
CSDE1-215ENST00000533818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-215ENST00000533818 NARSO43776 548 aaKnown RBP12.44□□□□□ -0.42
CSDE1-215ENST00000533818 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-215ENST00000533818 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 KIAA1841Q6NSI8 718 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
CSDE1-215ENST00000533818 RTN4RL1Q86UN2 441 aaPredicted RBP12.44□□□□□ -0.42
CSDE1-215ENST00000533818 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms