RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 SLC12A2P55011 1212 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 ANKRD13CQ8N6S4 541 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 RNF217Q8TC41 542 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 U2AF1L4Q8WU68 220 aaKnown RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 USP21Q9UK80 565 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 CCPG1Q9ULG6 757 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 MTMR6Q9Y217 621 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 ZBED4O75132 1171 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 GPC4O75487 556 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 NAPAP54920 295 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 KIF23Q02241 960 aaPredicted RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 CATSPER2Q96P56 530 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 TRIM55Q9BYV6 548 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 IKBKBO14920 756 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 GNPATO15228 680 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 NCF2P19878 526 aaPredicted RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 GLE1Q53GS7 698 aaKnown RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 SPATA1Q5VX52 437 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 FAM47EQ6ZV65 393 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 UNC45AQ9H3U1 944 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 ATP6V0A4Q9HBG4 840 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 SMAPO00193 183 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 SLC27A2O14975 620 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 DTNBO60941 627 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 HOXD10P28358 340 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 GNA11P29992 359 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 EIF2B2P49770 351 aaKnown RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 CYTH1Q15438 398 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 PHKBQ93100 1093 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 PPP1R14BQ96C90 147 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 FAM193BQ96PV7 902 aaPredicted RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 NCOA5Q9HCD5 579 aaKnown RBP8.45□□□□□ -1.06
CSRP1-218ENST00000533402 STMN3Q9NZ72 180 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 TLK1Q9UKI8 766 aa8.45□□□□□ -1.06
CSRP1-218ENST00000533402 WDR91A4D1P6 747 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 APBA3O96018 575 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 HSPA9P38646 679 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 KPNB1Q14974 876 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 FAM186BQ8IYM0 893 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 MIEF2Q96C03 454 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 CFAP36Q96G28 342 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 MAML3Q96JK9 1138 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 TRPV6Q9H1D0 765 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 TMEM94Q12767 1356 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 GTPBP10A4D1E9 387 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 ANP32DO95626 131 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 UBTFL6P0CB48 400 aaPredicted RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 SPARCL1Q14515 664 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 ARID5BQ14865 1188 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 HORMAD1Q86X24 394 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 DACH2Q96NX9 599 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 F8W8V4 182 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 BCRP11274 1271 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 C17orf50Q8WW18 174 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 ESYT2A0FGR8 921 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 LSM1O15116 133 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 CALUO43852 315 aaPredicted RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 PYGBP11216 843 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 CA4P22748 312 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 ATG16L1Q676U5 607 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 FAM133AQ8N9E0 248 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 CATSPER1Q8NEC5 780 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 LSM14BQ9BX40 385 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 PPARGC1AQ9UBK2 798 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 JAK2O60674 1132 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 P4HA1P13674 534 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 RAB14P61106 215 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 VSTM4Q8IW00 320 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 GSTA1P08263 222 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 IL13P35225 146 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 NDUFA8P51970 172 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 KBTBD12Q3ZCT8 623 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 CNKSR1Q969H4 720 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 PANX2Q96RD6 677 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 VIPAS39Q9H9C1 493 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 EXOC7Q9UPT5 735 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 MAGEA13PA6NCF6 341 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 ITGB3BPQ13352 177 aaPredicted RBP8.44□□□□□ -1.06
CSRP1-218ENST00000533402 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 DTX3LQ8TDB6 740 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 TMEM165Q9HC07 324 aa8.44□□□□□ -1.06
CSRP1-218ENST00000533402 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
CSRP1-218ENST00000533402 NBNO60934 754 aa8.43□□□□□ -1.06
CSRP1-218ENST00000533402 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 PECAM1P16284 738 aaPredicted RBP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 GPTP24298 496 aa8.43□□□□□ -1.06
CSRP1-218ENST00000533402 NONOQ15233 471 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 DPCR1Q3MIW9 517 aa8.43□□□□□ -1.06
CSRP1-218ENST00000533402 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 ST13P5Q8NFI4 369 aaPredicted RBP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 FAM81AQ8TBF8 368 aa8.43□□□□□ -1.06
CSRP1-218ENST00000533402 ABT1Q9ULW3 272 aaKnown RBP8.43□□□□□ -1.06
CSRP1-218ENST00000533402 MAP3K2Q9Y2U5 619 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms