RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 EPOPA6NHQ4 379 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 REC8O95072 547 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 CA3P07451 260 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 WDR5P61964 334 aaKnown RBP20.39■□□□□ 0.85
SMG1-203ENST00000532700 FGD1P98174 961 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.85
SMG1-203ENST00000532700 JAKMIP3Q5VZ66 844 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 FBXL16Q8N461 479 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 CCDC155Q8N6L0 562 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 ATP6V0A1Q93050 837 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 MXRA8Q9BRK3 442 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 KCNH7Q9NS40 1196 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 MSRAQ9UJ68 235 aa20.39■□□□□ 0.85
SMG1-203ENST00000532700 LCHNA4D1U4 455 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 RFXAPO00287 272 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 CTSHP09668 335 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 SCG2P13521 617 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 MARK3P27448 753 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 PDIA3P30101 505 aaKnown RBP20.38■□□□□ 0.85
SMG1-203ENST00000532700 THPOP40225 353 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 CCT2P78371 535 aaKnown RBP20.38■□□□□ 0.85
SMG1-203ENST00000532700 MKRN4PQ13434 485 aaPredicted RBP20.38■□□□□ 0.85
SMG1-203ENST00000532700 RUFY4Q6ZNE9 571 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 HERC6Q8IVU3 1022 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 RASGRP4Q8TDF6 673 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 CRYGNQ8WXF5 182 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 UPF3BQ9BZI7 483 aaKnown RBP20.38■□□□□ 0.85
SMG1-203ENST00000532700 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 ZSWIM6Q9HCJ5 1215 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
SMG1-203ENST00000532700 FAM86B1E9PN63 330 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 EDIL3O43854 480 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 FAM86B2P0C5J1 330 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 SREBF1P36956 1147 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 EVCP57679 992 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 RUFY3Q7L099 469 aa20.37■□□□□ 0.85
SMG1-203ENST00000532700 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMG1-203ENST00000532700 KAT6AQ92794 2004 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 PRPF3O43395 683 aaKnown RBP20.36■□□□□ 0.85
SMG1-203ENST00000532700 ACTN1P12814 892 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 PPP2R2DQ66LE6 453 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 CNKSR3Q6P9H4 555 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 SLC9A7Q96T83 725 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 SLC28A3Q9HAS3 691 aa20.36■□□□□ 0.85
SMG1-203ENST00000532700 WDR81Q562E7 1941 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 LOXHD1Q8IVV2 1947 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 IGLV3-22A0A075B6J6 115 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 hCG_1984214I3L0E3 225 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 CCNE2O96020 404 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 ARHGAP4P98171 946 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 MARCH8Q5T0T0 291 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMG1-203ENST00000532700 ZNF713Q8N859 430 aaPredicted RBP20.35■□□□□ 0.85
SMG1-203ENST00000532700 ZMYND12Q9H0C1 365 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 AGO4Q9HCK5 861 aaKnown RBP20.35■□□□□ 0.85
SMG1-203ENST00000532700 MYO9BQ13459 2157 aa20.35■□□□□ 0.85
SMG1-203ENST00000532700 RSPH10B2B2RC85 870 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 MEIS1O00470 390 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 BAIAP3O94812 1187 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 RSPH10BP0C881 870 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 TAP1Q03518 808 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 CEP55Q53EZ4 464 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 KRT40Q6A162 431 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 DBF4BQ8NFT6 615 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 TRAPPC12Q8WVT3 735 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 SEPT1Q8WYJ6 367 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 JPH1Q9HDC5 661 aaPredicted RBP20.34■□□□□ 0.85
SMG1-203ENST00000532700 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
SMG1-203ENST00000532700 ESYT2A0FGR8 921 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 DDX39AO00148 427 aaKnown RBP20.33■□□□□ 0.85
SMG1-203ENST00000532700 DLL1O00548 723 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 LGR5O75473 907 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 PSMA5P28066 241 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 AP3B2Q13367 1082 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 GIMAP8Q8ND71 665 aaPredicted RBP20.33■□□□□ 0.85
SMG1-203ENST00000532700 PPM1EQ8WY54 764 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 CDHR1Q96JP9 859 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 AIFM3Q96NN9 605 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 SLC9A2Q9UBY0 812 aa20.33■□□□□ 0.85
SMG1-203ENST00000532700 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.85
SMG1-203ENST00000532700 EMSYQ7Z589 1322 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 DHX15O43143 795 aaKnown RBP20.32■□□□□ 0.84
SMG1-203ENST00000532700 FOSP01100 380 aaPredicted RBP20.32■□□□□ 0.84
SMG1-203ENST00000532700 CHRNA1P02708 482 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 IFNAR1P17181 557 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 ACTR2P61160 394 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 CCDC85BQ15834 202 aaPredicted RBP20.32■□□□□ 0.84
SMG1-203ENST00000532700 GRIK4Q16099 956 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 PLEKHG4Q58EX7 1191 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 FAM117BQ6P1L5 589 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 PHOSPHO2Q8TCD6 241 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 TRANK1O15050 2925 aa20.32■□□□□ 0.84
SMG1-203ENST00000532700 NFASCO94856 1347 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 KCNJ6P48051 423 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 PPFIA1Q13136 1202 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 STK3Q13188 491 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 GLG1Q92896 1179 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 COL25A1Q9BXS0 654 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms