RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SNRNP48Q6IEG0 339 aaKnown RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L6PQ6QN14 398 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 TSC1Q92574 1164 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 DCP1AQ9NPI6 582 aaPredicted RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 ZNF148Q9UQR1 794 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 STX2P32856 288 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 RASSF7Q02833 373 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 CABS1Q96KC9 395 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 FAM84BQ96KN1 310 aaPredicted RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 NXF1Q9UBU9 619 aaKnown RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 ANAPC5Q9UJX4 755 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 IFNAR1P17181 557 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 NAA35Q5VZE5 725 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 H7C0C1 242 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 MED7O43513 233 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 ATP5OP48047 213 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 FKBP3Q00688 224 aaKnown RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 RILPQ96NA2 401 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 MARCH10Q8NA82 808 aaPredicted RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 PSMD6Q15008 389 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 PODNQ7Z5L7 613 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 LRRIQ1Q96JM4 1722 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 CASP14P31944 242 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 SPP2Q13103 211 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 TOB2Q14106 344 aaPredicted RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 C7orf31Q8N865 590 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 ATF2P15336 505 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 CD58P19256 250 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 ARMCX2Q7L311 632 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 P2RX5Q93086 422 aa16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 CPSF3Q9UKF6 684 aaKnown RBP16.04■□□□□ 0.16
PCDHA9-202ENST00000532602 PASKQ96RG2 1323 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 CTNNA1P35221 906 aaKnown RBP16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 RASSF2P50749 326 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 ARHGAP4P98171 946 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 LLGL1Q15334 1064 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 MGARPQ8TDB4 240 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 RSRC1Q96IZ7 334 aaKnown RBP16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 UTYO14607 1347 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 LIFRP42702 1097 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 ELF1P32519 619 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 MRFAP1L1Q96HT8 127 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 LRRC4Q9HBW1 653 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 NRBP1Q9UHY1 535 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 MAGED2Q9UNF1 606 aaPredicted RBP16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 GSTA1P08263 222 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 GSTA2P09210 222 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 SATB1Q01826 763 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 RBL2Q08999 1139 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 ENAHQ8N8S7 591 aaPredicted RBP16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 OXER1Q8TDS5 423 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 RMDN3Q96TC7 470 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 PPP2R2CQ9Y2T4 447 aa16.03■□□□□ 0.16
PCDHA9-202ENST00000532602 MTMR1Q13613 665 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 MESDQ14696 234 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 PAGE5Q96GU1 130 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 GCNAQ96QF7 691 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 TTC1Q99614 292 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 HOXC10Q9NYD6 342 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 PHLPP2Q6ZVD8 1323 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 GNAT1P11488 350 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 PEX3P56589 373 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 DPH5Q9H2P9 285 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 PARVGQ9HBI0 331 aa16.02■□□□□ 0.16
PCDHA9-202ENST00000532602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 FEM1BQ9UK73 627 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 SLC8A2Q9UPR5 921 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 SETBP1Q9Y6X0 1596 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 POTEMA6NI47 508 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 ZBTB5O15062 677 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 ANXA13P27216 316 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 RESTQ13127 1097 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 AP3B2Q13367 1082 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 FAM167AQ96KS9 214 aa16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 UBE2TQ9NPD8 197 aaPredicted RBP16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 CASQ2O14958 399 aaPredicted RBP16.02■□□□□ 0.15
PCDHA9-202ENST00000532602 ARL4AP40617 200 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms