RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ADCY7P51828 1080 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 MKRN4PQ13434 485 aaPredicted RBP21.69■■□□□ 1.06
SSH3-209ENST00000532600 PKN1Q16512 942 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 CNKSR3Q6P9H4 555 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 SPRED2Q7Z698 418 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 ANO3Q9BYT9 981 aa21.69■■□□□ 1.06
SSH3-209ENST00000532600 SMCO2A6NFE2 343 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 EPOPA6NHQ4 379 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 PARNO95453 639 aaKnown RBP21.68■■□□□ 1.06
SSH3-209ENST00000532600 PFKFB3Q16875 520 aaPredicted RBP21.68■■□□□ 1.06
SSH3-209ENST00000532600 GIMAP8Q8ND71 665 aaPredicted RBP21.68■■□□□ 1.06
SSH3-209ENST00000532600 LMBR1Q8WVP7 490 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 CDHR1Q96JP9 859 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 PCYT2Q99447 389 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 PRDM6Q9NQX0 595 aa21.68■■□□□ 1.06
SSH3-209ENST00000532600 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
SSH3-209ENST00000532600 hCG_1984214I3L0E3 225 aa21.67■■□□□ 1.06
SSH3-209ENST00000532600 ARP10275 920 aa21.67■■□□□ 1.06
SSH3-209ENST00000532600 NTRK3Q16288 839 aa21.67■■□□□ 1.06
SSH3-209ENST00000532600 ZNF713Q8N859 430 aaPredicted RBP21.67■■□□□ 1.06
SSH3-209ENST00000532600 GAS2L1Q99501 681 aaPredicted RBP21.67■■□□□ 1.06
SSH3-209ENST00000532600 COL25A1Q9BXS0 654 aaPredicted RBP21.67■■□□□ 1.06
SSH3-209ENST00000532600 KCNH7Q9NS40 1196 aa21.67■■□□□ 1.06
SSH3-209ENST00000532600 REV3LO60673 3130 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 LCHNA4D1U4 455 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 RSPH10B2B2RC85 870 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 RFXAPO00287 272 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 RSPH10BP0C881 870 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 SCG2P13521 617 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 SREBF1P36956 1147 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 FGD1P98174 961 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 TAP1Q03518 808 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 ITGB3BPQ13352 177 aaPredicted RBP21.66■■□□□ 1.06
SSH3-209ENST00000532600 TEX2Q8IWB9 1127 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 CRYGNQ8WXF5 182 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 SEPT1Q8WYJ6 367 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 CERS4Q9HA82 394 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 ZNF215Q9UL58 517 aaPredicted RBP21.66■■□□□ 1.06
SSH3-209ENST00000532600 SIP14410 1827 aa21.66■■□□□ 1.06
SSH3-209ENST00000532600 VCANP13611 3396 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 ABHD14A-ACY1A0A1B0GW23 586 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 MAFGO15525 162 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 LGR5O75473 907 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 KCNJ6P48051 423 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 EVCP57679 992 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.65■■□□□ 1.06
SSH3-209ENST00000532600 RUFY4Q6ZNE9 571 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 DBF4BQ8NFT6 615 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 PHKBQ93100 1093 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 SPTBN5Q9NRC6 3674 aaKnown RBP21.65■■□□□ 1.06
SSH3-209ENST00000532600 MICAL3Q7RTP6 2002 aa21.65■■□□□ 1.06
SSH3-209ENST00000532600 MEIS1O00470 390 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 PRPF3O43395 683 aaKnown RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 EPB41L2O43491 1005 aaKnown RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 FOSP01100 380 aaPredicted RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 CTSHP09668 335 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 MARK3P27448 753 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 AP3B2Q13367 1082 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 CEP55Q53EZ4 464 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 PLEKHG4Q58EX7 1191 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 MARCH8Q5T0T0 291 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 JAKMIP3Q5VZ66 844 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 PPM1EQ8WY54 764 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 EHMT1Q9H9B1 1298 aa21.64■■□□□ 1.05
SSH3-209ENST00000532600 AGO4Q9HCK5 861 aaKnown RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 JPH1Q9HDC5 661 aaPredicted RBP21.64■■□□□ 1.05
SSH3-209ENST00000532600 EMSYQ7Z589 1322 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 CCDC196A0A1B0GTZ2 297 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 ESYT2A0FGR8 921 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 FAM86B1E9PN63 330 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 FAM86B2P0C5J1 330 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 IGFBP4P22692 258 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 PDIA3P30101 505 aaKnown RBP21.63■■□□□ 1.05
SSH3-209ENST00000532600 FAM26DQ5JW98 314 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 ZBTB10Q96DT7 871 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 ZMYND12Q9H0C1 365 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 NCOA5Q9HCD5 579 aaKnown RBP21.63■■□□□ 1.05
SSH3-209ENST00000532600 ZSWIM6Q9HCJ5 1215 aa21.63■■□□□ 1.05
SSH3-209ENST00000532600 NFASCO94856 1347 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 NRCAMQ92823 1304 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 MBLAC1A4D2B0 266 aaPredicted RBP21.62■■□□□ 1.05
SSH3-209ENST00000532600 TLL1O43897 1013 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 CAND2O75155 1236 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 GJB5O95377 273 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 GNAT1P11488 350 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 PSMA5P28066 241 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 IKBKEQ14164 716 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 RUFY3Q7L099 469 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 ERAP1Q9NZ08 941 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 SLC9A2Q9UBY0 812 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 COL4A4P53420 1690 aaPredicted RBP21.62■■□□□ 1.05
SSH3-209ENST00000532600 KAT6AQ92794 2004 aa21.62■■□□□ 1.05
SSH3-209ENST00000532600 IGLV3-22A0A075B6J6 115 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 EDIL3O43854 480 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 CCNE2O96020 404 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms