RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GLE1Q53GS7 698 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PPP4R3AQ6IN85 833 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 KCTD1Q719H9 257 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 TAOK1Q7L7X3 1001 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PHLDB2Q86SQ0 1253 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 CDAN1Q8IWY9 1227 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 SMCR8Q8TEV9 937 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 CENPKQ9BS16 269 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 RMND1Q9NWS8 449 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 FAF1Q9UNN5 650 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 TRAF5O00463 557 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 POLR2DO15514 142 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 SRGAP2O75044 1071 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ATP6V1G2O95670 118 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PARP1P09874 1014 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 GNAT2P19087 354 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ADD1P35611 737 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC1A4P43007 532 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PTGER2P43116 358 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 PRPF4BQ13523 1007 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 TNFAIP1Q13829 316 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 UBE3CQ15386 1083 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ENOX1Q8TC92 643 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 MAIP1Q8WWC4 291 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 SEC16BQ96JE7 1060 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 RMDN2Q96LZ7 410 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 DCP1AQ9NPI6 582 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 RHBDL2Q9NX52 303 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 CORO1CQ9ULV4 474 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ZHX2Q9Y6X8 837 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 DLG5Q8TDM6 1919 aa7.4□□□□□ -1.22
TGFBR3-209ENST00000532540 ZNF541Q9H0D2 1346 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 RGS16O15492 202 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 MFAP3LO75121 409 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 FGFR2P21802 821 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 ZBTB16Q05516 673 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 SFSWAPQ12872 951 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 SPP2Q13103 211 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 CFAP157Q5JU67 520 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 AKNAD1Q5T1N1 836 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 SPATA1Q5VX52 437 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 TRIML1Q8N9V2 468 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 LINC00301Q8NCQ3 95 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 TRPM4Q8TD43 1214 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 MCUR1Q96AQ8 359 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 NOX5Q96PH1 765 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 ELAC2Q9BQ52 826 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.238e-7■■■■■ 191.4
TGFBR3-209ENST00000532540 SEC63Q9UGP8 760 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 INTUQ9ULD6 942 aa7.4□□□□□ -1.23
TGFBR3-209ENST00000532540 A0A1W2PRG0 241 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD62A6NC57 917 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 POTEIP0CG38 1075 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 EPHX2P34913 555 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MAGEA1P43355 309 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 IFNAR2P48551 515 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 RAD23BP54727 409 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 BIRC3Q13489 604 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 BZW1Q7L1Q6 419 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 LONP2Q86WA8 852 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MOV10L1Q9BXT6 1211 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.39□□□□□ -1.231e-6■■■□□ 14.7
TGFBR3-209ENST00000532540 NKIRAS1Q9NYS0 192 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 NFU1Q9UMS0 254 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 CLIC4Q9Y696 253 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 LMO7Q8WWI1 1683 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 RTN3O95197 1032 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 NDUFA10O95299 355 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ABCB5Q2M3G0 1257 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 GRAMD4Q6IC98 578 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 TC2NQ8N9U0 490 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 IQCDQ96DY2 449 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MMS19Q96T76 1030 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 IFIH1Q9BYX4 1025 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 KRT23Q9C075 422 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MIS12Q9H081 205 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ELP3Q9H9T3 547 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 DLGAP2Q9P1A6 1054 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 GSTTP1A0A1W2PQM5 241 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 GSG1L2A8MUP6 293 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 PSMA7O14818 248 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF189O75820 626 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 CELF2O95319 508 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 SYF2O95926 243 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MYBL1P10243 752 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MRPS25P82663 173 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 GRIK3Q13003 919 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 PDE1CQ14123 709 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 RTN1Q16799 776 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 NSMFQ6X4W1 530 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 KDM7AQ6ZMT4 941 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 TBC1D10CQ8IV04 446 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms