RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 KIAA1217Q5T5P2 1943 aa24.62■■□□□ 1.53
PACSIN3-209ENST00000532457 SPATA31C2B4DYI2 1134 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 RGS2P41220 211 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 SP2Q02086 613 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 MAP2K5Q13163 448 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 MCM6Q14566 821 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 ANO6Q4KMQ2 910 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 NLRX1Q86UT6 975 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 GJD2Q9UKL4 321 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 MAN1B1Q9UKM7 699 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 TELO2Q9Y4R8 837 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 TRIM17Q9Y577 477 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 CASP8AP2Q9UKL3 1982 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 SLITRK3O94933 977 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 KCNA2P16389 499 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 RPA1P27694 616 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 PSMC6P62333 389 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 ZNF792Q3KQV3 632 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 C11orf57Q6ZUT1 292 aaPredicted RBP24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 DNAJC25Q9H1X3 360 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 PRDM10Q9NQV6 1147 aa24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 HOOK1Q9UJC3 728 aaKnown RBP24.61■■□□□ 1.53
PACSIN3-209ENST00000532457 POTEFA5A3E0 1075 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 E9PMD0 336 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 STAM2O75886 525 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 CYP4A11Q02928 519 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 DHX8Q14562 1220 aaKnown RBP24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 POTEGQ6S5H5 508 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 RAD54LQ92698 747 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 DYDC2Q96IM9 177 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 CDK5RAP3Q96JB5 506 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 CUEDC2Q9H467 287 aa24.6■■□□□ 1.53
PACSIN3-209ENST00000532457 DOCK3Q8IZD9 2030 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 MAFGO15525 162 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 GTPBP6O43824 516 aaPredicted RBP24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 CCNE2O96020 404 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 FLT3LGP49771 235 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 PRKCZQ05513 592 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 CTTNQ14247 550 aaKnown RBP24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 DPCR1Q3MIW9 517 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 SEPT14Q6ZU15 432 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 POLR3CQ9BUI4 534 aaPredicted RBP24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 GRPEL1Q9HAV7 217 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 TBC1D22BQ9NU19 505 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 ZNF236Q9UL36 1845 aa24.59■■□□□ 1.53
PACSIN3-209ENST00000532457 NLRP12P59046 1061 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 CAP1Q01518 475 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 PDE4DQ08499 809 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 EEPD1Q7L9B9 569 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 ERMNQ8TAM6 284 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 USP6NLQ92738 828 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 SMARCE1Q969G3 411 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 WRAP73Q9P2S5 460 aaPredicted RBP24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 STK17AQ9UEE5 414 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 DIS3Q9Y2L1 958 aaKnown RBP24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 ZSWIM8A7E2V4 1837 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 HOXC6P09630 235 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 XRCC5P13010 732 aaKnown RBP24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 ICAM3P32942 547 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 EPHA7Q15375 998 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 STX1AQ16623 288 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 MORC4Q8TE76 937 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 APBA2Q99767 749 aa24.58■■□□□ 1.53
PACSIN3-209ENST00000532457 ZBTB39O15060 712 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 SLC26A4O43511 780 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 IRF5Q13568 498 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 MORC3Q14149 939 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 CTU1Q7Z7A3 348 aaKnown RBP24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 RAET1EQ8TD07 263 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 LARP4BQ92615 738 aaKnown RBP24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 GABRQQ9UN88 632 aa24.57■■□□□ 1.52
PACSIN3-209ENST00000532457 KDM3AQ9Y4C1 1321 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 MYMKA6NI61 221 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 SORBS3O60504 671 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 CYP2B6P20813 491 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 HAUS3Q68CZ6 603 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 SV2BQ7L1I2 683 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 C7orf25Q9BPX7 421 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 NT5C3AQ9H0P0 336 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 ANO10Q9NW15 660 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 KLRC4O43908 158 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 XRCC6P12956 609 aaKnown RBP eCLIP24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 GNPTABQ3T906 1256 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 MIER3Q7Z3K6 550 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 TPH2Q8IWU9 490 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 TRMT44Q8IYL2 757 aaKnown RBP24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 CCDC34Q96HJ3 373 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 MPHOSPH6Q99547 160 aaKnown RBP24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 TRIM9Q9C026 710 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 MAGEF1Q9HAY2 307 aa24.56■■□□□ 1.52
PACSIN3-209ENST00000532457 MCM3APO60318 1980 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 DOCK5Q9H7D0 1870 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 SMC2O95347 1197 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 PKN2Q16513 984 aaKnown RBP24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 CBX8Q9HC52 389 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 TUFT1Q9NNX1 390 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 STK24Q9Y6E0 443 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 CENPFP49454 3210 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 LRRC37A2A6NM11 1700 aa24.55■■□□□ 1.52
PACSIN3-209ENST00000532457 B4DLN1 442 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms