RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MKNK1Q9BUB5 465 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 SPATC1LQ9H0A9 340 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 SAP130Q9H0E3 1048 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 GINM1Q9NU53 330 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
TRIM53CP-201ENST00000531490 CHD7Q9P2D1 2997 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 A0A0D9SFI3 127 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 PGK2P07205 417 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 AKR1B1P15121 316 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 DGKGP49619 791 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 SBK1Q52WX2 424 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 NCAPG2Q86XI2 1143 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 BHMTQ93088 406 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 COL26A1Q96A83 441 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 FAM122AQ96E09 287 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 IFT43Q96FT9 208 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 MAML3Q96JK9 1138 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
TRIM53CP-201ENST00000531490 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 PRDM1O75626 825 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 NEFLP07196 543 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 ACRP10323 421 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 RARBP10826 455 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 GSPT1P15170 499 aaKnown RBP8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 SDSP20132 328 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 USP14P54578 494 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 COG2Q14746 738 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 MCMDC2Q4G0Z9 681 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 C16orf86Q6ZW13 317 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 ZNF589Q86UQ0 364 aaPredicted RBP8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 CABP5Q9NP86 173 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 THEGQ9P2T0 379 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 LTBP2Q14767 1821 aa8.3□□□□□ -1.08
TRIM53CP-201ENST00000531490 MYADML2A6NDP7 307 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 OPLAHO14841 1288 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 STRNO43815 780 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 CSF2RAP15509 400 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 EPB42P16452 691 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 GNAT2P19087 354 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 ALAS2P22557 587 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 TDO2P48775 406 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 ARSDP51689 593 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 TFF2Q03403 129 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 NAA30Q147X3 362 aaPredicted RBP8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 TMEM240Q5SV17 173 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 C16orf46Q6P387 395 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 GIMAP6Q6P9H5 292 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 CWC27Q6UX04 472 aaKnown RBP8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 IL25Q9H293 177 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 ARPP21Q9UBL0 812 aaPredicted RBP8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 SWAP70Q9UH65 585 aa8.29□□□□□ -1.08
TRIM53CP-201ENST00000531490 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 FLOT1O75955 427 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 TIMP1P01033 207 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 FGAP02671 866 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 HSPD1P10809 573 aaKnown RBP8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 MRPS5P82675 430 aaKnown RBP8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 CCINQ13939 588 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 TMEM132BQ14DG7 1078 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 RNF180Q86T96 592 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 SHCBP1Q8NEM2 672 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 NAPBQ9H115 298 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 NKX2-4Q9H2Z4 354 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 SUV39H2Q9H5I1 410 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 MKNK2Q9HBH9 465 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 HOXC10Q9NYD6 342 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 TBX21Q9UL17 535 aa8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 YBX2Q9Y2T7 364 aaKnown RBP8.28□□□□□ -1.08
TRIM53CP-201ENST00000531490 RLFQ13129 1914 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 DCDC2CA8MYV0 355 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 FCER1AP12319 257 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 EEF2P13639 858 aaKnown RBP8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 MYOGP15173 224 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 ADH7P40394 386 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 KCNQ1P51787 676 aa8.27□□□□□ -1.09
TRIM53CP-201ENST00000531490 ACLYP53396 1101 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms