RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
PTPN11-204ENST00000531326 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
PTPN11-204ENST00000531326 MTUS1Q9ULD2 1270 aa20.54■□□□□ 0.88
PTPN11-204ENST00000531326 COG5Q9UP83 839 aa20.54■□□□□ 0.88
PTPN11-204ENST00000531326 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 H3BRB1 525 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 EFCAB14O75071 495 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 PLEKHA8P1O95397 391 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 THPOP40225 353 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 ERVK-21P61565 698 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 DBF4BQ8NFT6 615 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
PTPN11-204ENST00000531326 OSBPL7Q9BZF2 842 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 TUT1Q9H6E5 874 aaKnown RBP20.53■□□□□ 0.88
PTPN11-204ENST00000531326 SUGCTQ9HAC7 445 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 FAM217BQ9NTX9 383 aaPredicted RBP20.53■□□□□ 0.88
PTPN11-204ENST00000531326 RAPGEFL1Q9UHV5 662 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 TELO2Q9Y4R8 837 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 NID2Q14112 1375 aa20.53■□□□□ 0.88
PTPN11-204ENST00000531326 C17orf102A2RUQ5 167 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 GOLGA8AA7E2F4 631 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 RSPH10B2B2RC85 870 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 TREHO43280 583 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 RSPH10BP0C881 870 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 PDIA3P30101 505 aaKnown RBP20.52■□□□□ 0.88
PTPN11-204ENST00000531326 ICAM3P32942 547 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 RTN1Q16799 776 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 ATP6V0A1Q93050 837 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 HLA-CQ95604 372 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 TGS1Q96RS0 853 aaKnown RBP20.52■□□□□ 0.88
PTPN11-204ENST00000531326 RNPEPQ9H4A4 650 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 LMCD1Q9NZU5 365 aa20.52■□□□□ 0.88
PTPN11-204ENST00000531326 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
PTPN11-204ENST00000531326 EMSYQ7Z589 1322 aa20.52■□□□□ 0.87
PTPN11-204ENST00000531326 SPATA31C2B4DYI2 1134 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 CDC27P30260 824 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 GNAQP50148 359 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 RABEP1Q15276 862 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 METTL7BQ6UX53 244 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 CYFIP1Q7L576 1253 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 SRBD1Q8N5C6 995 aaKnown RBP20.51■□□□□ 0.87
PTPN11-204ENST00000531326 ZNF274Q96GC6 653 aaPredicted RBP20.51■□□□□ 0.87
PTPN11-204ENST00000531326 GPR20Q99678 358 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 BRWD1Q9NSI6 2320 aa20.51■□□□□ 0.87
PTPN11-204ENST00000531326 STAM2O75886 525 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 SMARCA1P28370 1054 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
PTPN11-204ENST00000531326 ANKRD1Q15327 319 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 TRIM50Q86XT4 487 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 CMTR1Q8N1G2 835 aaKnown RBP20.5■□□□□ 0.87
PTPN11-204ENST00000531326 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 SPZ1Q9BXG8 430 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
PTPN11-204ENST00000531326 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
PTPN11-204ENST00000531326 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
PTPN11-204ENST00000531326 MEIS2O14770 477 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 FIBPO43427 364 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 HTRA4P83105 476 aaPredicted RBP20.49■□□□□ 0.87
PTPN11-204ENST00000531326 FUT2Q10981 343 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 NEDD9Q14511 834 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 MYOCDQ8IZQ8 938 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 C17orf80Q9BSJ5 609 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 INSL6Q9Y581 213 aa20.49■□□□□ 0.87
PTPN11-204ENST00000531326 CTSHP09668 335 aa20.48■□□□□ 0.87
PTPN11-204ENST00000531326 ADD1P35611 737 aaKnown RBP20.48■□□□□ 0.87
PTPN11-204ENST00000531326 ADAM17P78536 824 aa20.48■□□□□ 0.87
PTPN11-204ENST00000531326 SP7Q8TDD2 431 aaPredicted RBP20.48■□□□□ 0.87
PTPN11-204ENST00000531326 SETD4Q9NVD3 440 aa20.48■□□□□ 0.87
PTPN11-204ENST00000531326 PIK3CDO00329 1044 aa20.47■□□□□ 0.87
PTPN11-204ENST00000531326 AMHP03971 560 aa20.47■□□□□ 0.87
PTPN11-204ENST00000531326 CCT2P78371 535 aaKnown RBP20.47■□□□□ 0.87
PTPN11-204ENST00000531326 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
PTPN11-204ENST00000531326 SMARCC2Q8TAQ2 1214 aa20.47■□□□□ 0.87
PTPN11-204ENST00000531326 RRP36Q96EU6 259 aaKnown RBP20.47■□□□□ 0.87
PTPN11-204ENST00000531326 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
PTPN11-204ENST00000531326 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
PTPN11-204ENST00000531326 CAND2O75155 1236 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 LARGE1O95461 756 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 STK3Q13188 491 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 NTRK3Q16288 839 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 ME3Q16798 604 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 UTP14CQ5TAP6 766 aaKnown RBP20.46■□□□□ 0.87
PTPN11-204ENST00000531326 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 SENP7Q9BQF6 1050 aa20.46■□□□□ 0.87
PTPN11-204ENST00000531326 CCDC196A0A1B0GTZ2 297 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.45■□□□□ 0.86
PTPN11-204ENST00000531326 PFKFB2O60825 505 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 SP4Q02446 784 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 SCRN1Q12765 414 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 FBXO22Q8NEZ5 403 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 LMBR1Q8WVP7 490 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 SEPT8Q92599 483 aa20.45■□□□□ 0.86
PTPN11-204ENST00000531326 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms