RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 KLF18A0A0U1RQI7 1052 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 LCHNA4D1U4 455 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 EPOPA6NHQ4 379 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 GOLGA8AA7E2F4 631 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 GOLGA8BA8MQT2 603 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 AMHP03971 560 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 CTSHP09668 335 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 PLEKHG4Q58EX7 1191 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 FAM117BQ6P1L5 589 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 TEX2Q8IWB9 1127 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 IL27Q8NEV9 243 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 GLG1Q92896 1179 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 RIC8AQ9NPQ8 531 aa25.51■■□□□ 1.67
TRAPPC4-210ENST00000531290 FOSP01100 380 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 PPP1R18Q6NYC8 613 aa25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 LMBR1Q8WVP7 490 aa25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 CNTNAP5Q8WYK1 1306 aa25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 ERAP1Q9NZ08 941 aa25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 CHD7Q9P2D1 2997 aa25.5■■□□□ 1.67
TRAPPC4-210ENST00000531290 GSTTP1A0A1W2PQM5 241 aa25.49■■□□□ 1.67
TRAPPC4-210ENST00000531290 FUT2Q10981 343 aa25.49■■□□□ 1.67
TRAPPC4-210ENST00000531290 MYOCDQ8IZQ8 938 aa25.49■■□□□ 1.67
TRAPPC4-210ENST00000531290 SMARCAD1Q9H4L7 1026 aa25.49■■□□□ 1.67
TRAPPC4-210ENST00000531290 INSL6Q9Y581 213 aa25.49■■□□□ 1.67
TRAPPC4-210ENST00000531290 SMCO2A6NFE2 343 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 hCG_1984214I3L0E3 225 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 ADCY7P51828 1080 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 ADAM17P78536 824 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 PPFIA1Q13136 1202 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 GRB10Q13322 594 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 ZNF713Q8N859 430 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 MXRA8Q9BRK3 442 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 GLT8D2Q9H1C3 349 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 TANC1Q9C0D5 1861 aa25.48■■□□□ 1.67
TRAPPC4-210ENST00000531290 CCDC196A0A1B0GTZ2 297 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 MARK3P27448 753 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 RCAN1P53805 252 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 TYW1BQ6NUM6 668 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 TAF2Q6P1X5 1199 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 TGS1Q96RS0 853 aaKnown RBP25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 JPH1Q9HDC5 661 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 KCNH7Q9NS40 1196 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 BARHL2Q9NY43 387 aa25.47■■□□□ 1.67
TRAPPC4-210ENST00000531290 RBAK-RBAKDNI3L0D1 243 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 STXBP3O00186 592 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 AAK1Q2M2I8 961 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 KRT40Q6A162 431 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 SPRED2Q7Z698 418 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 RSPH3Q86UC2 560 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 PGBD1Q96JS3 809 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 SDF4Q9BRK5 362 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 FAM217BQ9NTX9 383 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 MTUS1Q9ULD2 1270 aa25.46■■□□□ 1.67
TRAPPC4-210ENST00000531290 LINC01553A4QN01 128 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 CDC27P30260 824 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 METAP2P50579 478 aaKnown RBP eCLIP25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 ERVK-21P61565 698 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 GRIK4Q16099 956 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 FAM26DQ5JW98 314 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 CYP2W1Q8TAV3 490 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 APBB2Q92870 758 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 TNPO1Q92973 898 aaKnown RBP25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 JAKMIP1Q96N16 626 aaKnown RBP25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 ANO3Q9BYT9 981 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 AZI2Q9H6S1 392 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 SLC9A2Q9UBY0 812 aa25.45■■□□□ 1.66
TRAPPC4-210ENST00000531290 CPA1P15085 419 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 ADD1P35611 737 aaKnown RBP25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 ZNF76P36508 570 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 AP3B2Q13367 1082 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 CEP55Q53EZ4 464 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 Q6ZUG5 572 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 RPAINQ86UA6 219 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 TET1Q8NFU7 2136 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 KCNB2Q92953 911 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 IFIH1Q9BYX4 1025 aaKnown RBP25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 TUBE1Q9UJT0 475 aa25.44■■□□□ 1.66
TRAPPC4-210ENST00000531290 MYH7BA7E2Y1 1941 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 TNFRSF10AO00220 468 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 APOBRQ0VD83 1088 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 MKRN4PQ13434 485 aaPredicted RBP25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 BLOC1S2Q6QNY1 142 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 RUFY4Q6ZNE9 571 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 ADAMTS19Q8TE59 1207 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 OSBPL7Q9BZF2 842 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 SUGCTQ9HAC7 445 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 LMCD1Q9NZU5 365 aa25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 SPTBN5Q9NRC6 3674 aaKnown RBP25.43■■□□□ 1.66
TRAPPC4-210ENST00000531290 TRIP12Q14669 1992 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 RRN3P2A6NIE6 340 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 LPXNO60711 386 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 UPP2O95045 317 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 CHRNA1P02708 482 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 ARP10275 920 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 HSPA4P34932 840 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 IGBP1P78318 339 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 GDPD5Q8WTR4 605 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 BRF1Q92994 677 aa25.42■■□□□ 1.66
TRAPPC4-210ENST00000531290 TOP1MTQ969P6 601 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms