RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IFT74Q96LB3 600 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 TRIM31Q9BZY9 425 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
PCF11-204ENST00000530660 DPH5Q9H2P9 285 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GOLPH3Q9H4A6 298 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 RHBDL2Q9NX52 303 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 LNPEPQ9UIQ6 1025 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
PCF11-204ENST00000530660 PEX11AO75192 247 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 TPBGLP0DKB5 382 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GSTT1P30711 240 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 LRRC14Q15048 493 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 GALNT17Q6IS24 598 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 FAM47EQ6ZV65 393 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 DNAJC9Q8WXX5 260 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 APPBP2Q92624 585 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 ETNK1Q9HBU6 452 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
PCF11-204ENST00000530660 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
PCF11-204ENST00000530660 C5P01031 1676 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 EYA2O00167 538 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 MTIF2P46199 727 aaKnown RBP15.41■□□□□ 0.06
PCF11-204ENST00000530660 PTDSS1P48651 473 aaKnown RBP15.41■□□□□ 0.06
PCF11-204ENST00000530660 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 DTNBP1Q96EV8 351 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 ANKRD27Q96NW4 1050 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 NOC4LQ9BVI4 516 aaKnown RBP15.41■□□□□ 0.06
PCF11-204ENST00000530660 KRT23Q9C075 422 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 VCXQ9H320 206 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 UBR1Q8IWV7 1749 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 hCG_2014768A0A024R1R8 64 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 MMP13P45452 471 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
PCF11-204ENST00000530660 CCDC113Q9H0I3 377 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 AMACRQ9UHK6 382 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 AFDNP55196 1824 aaKnown RBP15.41■□□□□ 0.06
PCF11-204ENST00000530660 WDR19Q8NEZ3 1342 aa15.41■□□□□ 0.06
PCF11-204ENST00000530660 KCNK3O14649 394 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 SERPINB4P48594 390 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 ZC2HC1CQ53FD0 456 aaPredicted RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 UHMK1Q8TAS1 419 aaKnown RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 SHISA4Q96DD7 197 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 MAF1Q9H063 256 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 FLOT1O75955 427 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 SESN3P58005 492 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 STAG2Q8N3U4 1231 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 RNF10Q8N5U6 811 aaKnown RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 MGARPQ8TDB4 240 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 STK32AQ8WU08 396 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 NUDCD1Q96RS6 583 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 GRID2IPA4D2P6 1211 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 IFNAR1P17181 557 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 INHBCP55103 352 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 MIIPQ5JXC2 388 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 APBB1IPQ7Z5R6 666 aaPredicted RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 CNOT6LQ96LI5 555 aaKnown RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 RMDN2Q96LZ7 410 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 CELF4Q9BZC1 486 aaKnown RBP15.4■□□□□ 0.06
PCF11-204ENST00000530660 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
PCF11-204ENST00000530660 DDX60Q8IY21 1712 aaKnown RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 KLRC1P26715 233 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 MUM1Q2TAK8 710 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 APLFQ8IW19 511 aaPredicted RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCF11-204ENST00000530660 WASF1Q92558 559 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 FAM136AQ96C01 138 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 ZKSCAN3Q9BRR0 538 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 SCOCQ9UIL1 159 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 TMEM59LQ9UK28 342 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 ZNF510Q9Y2H8 683 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 PJA2O43164 708 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 LCA5LO95447 670 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 ZFYP08048 801 aaPredicted RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 BPIFB4P59827 614 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 PTGDRQ13258 359 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 TTI2Q6NXR4 508 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 BICDL1Q6ZP65 573 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 DUSP9Q99956 384 aaKnown RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 NSRP1Q9H0G5 558 aaKnown RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 MLXIPLQ9NP71 852 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 DMAP1Q9NPF5 467 aaPredicted RBP15.39■□□□□ 0.05
PCF11-204ENST00000530660 ATXN10Q9UBB4 475 aa15.39■□□□□ 0.05
PCF11-204ENST00000530660 TCP11X1B4DZS4 312 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 CEP104O60308 925 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 SPATA31D3P0C874 917 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 AKNAD1Q5T1N1 836 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 UBAP2Q5T6F2 1119 aaKnown RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 SPATA31D4Q6ZUB0 917 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms