RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ZNF286BP0CG31 522 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 KRT76Q01546 638 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 FOXD4L5Q5VV16 416 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-220ENST00000530567 ZNF746Q6NUN9 644 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-220ENST00000530567 NECAB2Q7Z6G3 386 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 FOXD4L4Q8WXT5 416 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-220ENST00000530567 SEPT1Q8WYJ6 367 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 C16orf70Q9BSU1 422 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 UNC45AQ9H3U1 944 aa24.1■■□□□ 1.45
CAPN1-220ENST00000530567 BRD1O95696 1058 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 F13A1P00488 732 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 F2P00734 622 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 LGALS2P05162 132 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 TCF7P36402 384 aaPredicted RBP24.09■■□□□ 1.45
CAPN1-220ENST00000530567 SPIRE1Q08AE8 756 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 TRIM50Q86XT4 487 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 SLFN12Q8IYM2 578 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 PCYT2Q99447 389 aa24.09■■□□□ 1.45
CAPN1-220ENST00000530567 MTG1Q9BT17 334 aaPredicted RBP24.09■■□□□ 1.45
CAPN1-220ENST00000530567 SENP6Q9GZR1 1112 aaPredicted RBP24.09■■□□□ 1.45
CAPN1-220ENST00000530567 GRIN2DO15399 1336 aa24.08■■□□□ 1.45
CAPN1-220ENST00000530567 OR52Z1P0C646 297 aa24.08■■□□□ 1.44
CAPN1-220ENST00000530567 PPP2R5CQ13362 524 aa24.08■■□□□ 1.44
CAPN1-220ENST00000530567 ABHD15Q6UXT9 468 aa24.08■■□□□ 1.44
CAPN1-220ENST00000530567 DNAH12Q6ZR08 3092 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 IGKV6D-21A0A0A0MT36 114 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 LGR5O75473 907 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 CABYRO75952 493 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 PSMC6P62333 389 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 PTGDRQ13258 359 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 GLT1D1Q96MS3 346 aa24.07■■□□□ 1.44
CAPN1-220ENST00000530567 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
CAPN1-220ENST00000530567 EMSYQ7Z589 1322 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 WDR81Q562E7 1941 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 HAS3O00219 553 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 CHMP2AO43633 222 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 SUPT20HL2P0C7V6 817 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 SMAP1Q8IYB5 467 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-220ENST00000530567 STARD7Q9NQZ5 370 aa24.06■■□□□ 1.44
CAPN1-220ENST00000530567 ALPK3Q96L96 1907 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 WDR64B1ANS9 1081 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 EML1O00423 815 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 CAPN15O75808 1086 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 BAG4O95429 457 aaKnown RBP24.05■■□□□ 1.44
CAPN1-220ENST00000530567 ATP2C1P98194 919 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-220ENST00000530567 SNX17Q15036 470 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 UTP14CQ5TAP6 766 aaKnown RBP24.05■■□□□ 1.44
CAPN1-220ENST00000530567 CCDC60Q8IWA6 550 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-220ENST00000530567 TTC12Q9H892 705 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-220ENST00000530567 TCEAL9Q9UHQ7 104 aa24.05■■□□□ 1.44
CAPN1-220ENST00000530567 MARCH6O60337 910 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 TXKP42681 527 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 SLC43A3Q8NBI5 491 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 DISC1Q9NRI5 854 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 PCDHA12Q9UN75 941 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 PCDHA10Q9Y5I2 948 aa24.04■■□□□ 1.44
CAPN1-220ENST00000530567 SFNP31947 248 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 PSEN2P49810 448 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 JAK3P52333 1124 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 ATN1P54259 1190 aaPredicted RBP24.03■■□□□ 1.44
CAPN1-220ENST00000530567 SF3A1Q15459 793 aaKnown RBP24.03■■□□□ 1.44
CAPN1-220ENST00000530567 MIS18BP1Q6P0N0 1132 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 SLC39A5Q6ZMH5 540 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 RDM1Q8NG50 284 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 PPP1R13LQ8WUF5 828 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 USP28Q96RU2 1077 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 CLIC4Q9Y696 253 aa24.03■■□□□ 1.44
CAPN1-220ENST00000530567 A0A0U1RQG5 324 aaPredicted RBP24.02■■□□□ 1.44
CAPN1-220ENST00000530567 H3BRB1 525 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 LAD1O00515 517 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 ITGA7Q13683 1181 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 MFSD10Q14728 455 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 PTPAQ15257 358 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 IL17AQ16552 155 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 LRRC26Q2I0M4 334 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 MIER3Q7Z3K6 550 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 AFAP1L1Q8TED9 768 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 TUT1Q9H6E5 874 aaKnown RBP24.02■■□□□ 1.44
CAPN1-220ENST00000530567 IGSF9BQ9UPX0 1349 aa24.02■■□□□ 1.44
CAPN1-220ENST00000530567 PSAPP07602 524 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 PRPHP41219 470 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 RGS19P49795 217 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 CDK7P50613 346 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 KIAA0753Q2KHM9 967 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 NBPF20Q3BBV1 942 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 C1orf53Q5VUE5 145 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 SWSAP1Q6NVH7 229 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 VTI1AQ96AJ9 217 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 KATNAL1Q9BW62 490 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 SMARCAD1Q9H4L7 1026 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 SAMM50Q9Y512 469 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 POTEMA6NI47 508 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 ARVCFO00192 962 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 FXR2P51116 673 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■■■□ 20.3
CAPN1-220ENST00000530567 UGCGQ16739 394 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 NCAPH2Q6IBW4 605 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 PLPPR4Q7Z2D5 763 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 GLG1Q92896 1179 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 RNPEPQ9H4A4 650 aa24.01■■□□□ 1.43
CAPN1-220ENST00000530567 ERAP1Q9NZ08 941 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms