RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 THAP5Q7Z6K1 395 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 TDRD7Q8NHU6 1098 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 RWDD1Q9H446 243 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 KCNQ5Q9NR82 932 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 SEMA3GQ9NS98 782 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 FAM205AQ6ZU69 1335 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 SALL3Q9BXA9 1300 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 GLTPD2A6NH11 291 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 DDNO94850 711 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 SLITRK5O94991 958 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 HIBADHP31937 336 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 FYB2Q5VWT5 728 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 PCNX4Q63HM2 1172 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 SYDE1Q6ZW31 735 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 ZSCAN29Q8IWY8 852 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 MIPEPQ99797 713 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 CCDC8Q9H0W5 538 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 ATP13A1Q9HD20 1204 aa10.69□□□□□ -0.7
CCDC90B-217ENST00000530253 WDR90Q96KV7 1748 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 FBXO24O75426 580 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 RAD17O75943 681 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 TOMM70O94826 608 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 HTRA3P83110 453 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 DACT2Q5SW24 774 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 AACSQ86V21 672 aa10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 CLASRPQ8N2M8 674 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-217ENST00000530253 PDS5AQ29RF7 1337 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 PSMD14O00487 310 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 NFIBO00712 420 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 HSPA6P17066 643 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 CYP7A1P22680 504 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 MAPK8P45983 427 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 CAVIN4Q5BKX8 364 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 STRIP1Q5VSL9 837 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 CDKAL1Q5VV42 579 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 CIAPIN1Q6FI81 312 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 C16orf71Q8IYS4 520 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 CERS5Q8N5B7 392 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 FBXO15Q8NCQ5 510 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 GMLQ99445 158 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 WNT10AQ9GZT5 417 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 FAM8A1Q9UBU6 413 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 SNCAIPQ9Y6H5 919 aa10.67□□□□□ -0.7
CCDC90B-217ENST00000530253 RAC2P15153 192 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 EIF6P56537 245 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 NUCB1Q02818 461 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 LRFN4Q6PJG9 635 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 PRR23BQ6ZRT6 265 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 CILP2Q8IUL8 1156 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 HID1Q8IV36 788 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 LRRC56Q8IYG6 542 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 GPC2Q8N158 579 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 MXD3Q9BW11 206 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 JAG2Q9Y219 1238 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 AKAP11Q9UKA4 1901 aa10.66□□□□□ -0.7
CCDC90B-217ENST00000530253 H3BS24 57 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 CFPP27918 469 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 MCAMP43121 646 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 KIR3DL1P43629 444 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 ETF1P62495 437 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 FKBP1AP62942 108 aaKnown RBP10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 FGD1P98174 961 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 ANKRD45Q5TZF3 282 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 VPS37DQ86XT2 251 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 ALPK1Q96QP1 1244 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 CAPN6Q9Y6Q1 641 aa10.65□□□□□ -0.7
CCDC90B-217ENST00000530253 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 SALL1Q9NSC2 1324 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 UQCRFS1P1P0C7P4 283 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 SLBPQ14493 270 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 TNIP1Q15025 636 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 TTLL5Q6EMB2 1281 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 LETMD1Q6P1Q0 360 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 SV2BQ7L1I2 683 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 PLPPR2Q96GM1 343 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 LNPKQ9C0E8 428 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 C12orf49Q9H741 205 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 DENND2AQ9ULE3 1009 aa10.64□□□□□ -0.71
CCDC90B-217ENST00000530253 ADAMTSL1Q8N6G6 1762 aa10.63□□□□□ -0.71
CCDC90B-217ENST00000530253 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms