RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 IL17AQ16552 155 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 UBE2SQ16763 222 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
CMTM1-214ENST00000530141 Q4G0T1 1027 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 ERO1BQ86YB8 467 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 IGSF22Q8N9C0 903 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 ERMNQ8TAM6 284 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 ACER1Q8TDN7 264 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 FAM20AQ96MK3 541 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 MBOAT7Q96N66 472 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 NUP88Q99567 741 aaPredicted RBP9.19□□□□□ -0.94
CMTM1-214ENST00000530141 SLF1Q9BQI6 1058 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 WDR18Q9BV38 432 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 MAF1Q9H063 256 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 NT5C3AQ9H0P0 336 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.19□□□□□ -0.94
CMTM1-214ENST00000530141 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 LRWD1Q9UFC0 647 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 ZNF112Q9UJU3 913 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 PHIPQ8WWQ0 1821 aa9.19□□□□□ -0.94
CMTM1-214ENST00000530141 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 PLXNB2O15031 1838 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 ADAMTS3O15072 1205 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 CYP3A4P08684 503 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 CIITAP33076 1130 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 SREBF1P36956 1147 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 TECP42680 631 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 TXKP42681 527 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 AFMP43652 599 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 JAG1P78504 1218 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 ARHGAP4P98171 946 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 KARSQ15046 597 aaKnown RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 SHROOM1Q2M3G4 852 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 NOL9Q5SY16 702 aaKnown RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 HAUS3Q68CZ6 603 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 TDHQ8IZJ6 230 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 SPICE1Q8N0Z3 855 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 RPTORQ8N122 1335 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 PRPF38AQ8NAV1 312 aaKnown RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 ERCC4Q92889 916 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 CTAGE1Q96RT6 745 aa9.18□□□□□ -0.94
CMTM1-214ENST00000530141 SPTBN5Q9NRC6 3674 aaKnown RBP9.18□□□□□ -0.94
CMTM1-214ENST00000530141 FRMPD3Q5JV73 1810 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 A0A087X0B3 334 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 MEIS2O14770 477 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 ZBED4O75132 1171 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 TDP2O95551 362 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SERPINC1P01008 464 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 GNRH1P01148 92 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 RPN1P04843 607 aaKnown RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 ICAM1P05362 532 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 BCRP11274 1271 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 CLCN1P35523 988 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 ZNF76P36508 570 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 FCGRTP55899 365 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SETQ01105 290 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SPAG1Q07617 926 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 USH1GQ495M9 461 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 ZNF658Q5TYW1 1059 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SPATA1Q5VX52 437 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SV2BQ7L1I2 683 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 ANKRD23Q86SG2 305 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 SNX29Q8TEQ0 813 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 C12orf42Q96LP6 360 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 C7orf25Q9BPX7 421 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 UBE2OQ9C0C9 1292 aaKnown RBP9.17□□□□□ -0.94
CMTM1-214ENST00000530141 KBTBD4Q9NVX7 518 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 PCDHA12Q9UN75 941 aa9.17□□□□□ -0.94
CMTM1-214ENST00000530141 BAZ2BQ9UIF8 2168 aaKnown RBP9.16□□□□□ -0.94
CMTM1-214ENST00000530141 PVALEFA0A1B0GWK0 134 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 SLC37A4O43826 429 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-214ENST00000530141 RHOBTB3O94955 611 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 PLCG1P19174 1290 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 HOXD10P28358 340 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 FANCCQ00597 558 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 NCAPHQ15003 741 aa9.16□□□□□ -0.94
CMTM1-214ENST00000530141 ZYXQ15942 572 aaKnown RBP9.16□□□□□ -0.94
CMTM1-214ENST00000530141 TPD52L1Q16890 204 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms