RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 ZBTB48P10074 688 aaPredicted RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 KIF11P52732 1056 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 ITKQ08881 620 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 TUSC3Q13454 348 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 XP32Q5T750 250 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 BTBD8Q5XKL5 378 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 HDGFL2Q7Z4V5 671 aaPredicted RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 KIAA1958Q8N8K9 716 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 PUS7LQ9H0K6 701 aaKnown RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 IRF2BPLQ9H1B7 796 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 ZFP64Q9NPA5 681 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 RIC8BQ9NVN3 520 aa5.38□□□□□ -1.55
SVIP-203ENST00000529848 H2AFY2Q9P0M6 372 aaPredicted RBP5.38□□□□□ -1.55
SVIP-203ENST00000529848 OR14I1A6ND48 311 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 KATNA1O75449 491 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 LTFP02788 710 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 SLC9A1P19634 815 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 SDHBP21912 280 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 FAPQ12884 760 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 SLC9A5Q14940 896 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 TMEM132BQ14DG7 1078 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 KCNMB1Q16558 191 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 ODR4Q5SWX8 454 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 FYB2Q5VWT5 728 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 OLFML2BQ68BL8 750 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 CREB3L3Q68CJ9 461 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 RBM12BQ8IXT5 1001 aaKnown RBP5.37□□□□□ -1.55
SVIP-203ENST00000529848 COG1Q8WTW3 980 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 MTMR8Q96EF0 704 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 YIPF4Q9BSR8 244 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 ACSS2Q9NR19 701 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 KCNH7Q9NS40 1196 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 TOMM22Q9NS69 142 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 SPO11Q9Y5K1 396 aa5.37□□□□□ -1.55
SVIP-203ENST00000529848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.36□□□□□ -1.55
SVIP-203ENST00000529848 TCRBV5S2A0A599 114 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 PRAMEF25A6NGN4 478 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 ABLIM1O14639 778 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 GLI1P08151 1106 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 YBX3P16989 372 aaKnown RBP eCLIP5.36□□□□□ -1.559e-11■□□□□ 9.6
SVIP-203ENST00000529848 PTPN1P18031 435 aaKnown RBP5.36□□□□□ -1.55
SVIP-203ENST00000529848 MAPKAPK2P49137 400 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 EPHA5P54756 1037 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 SESN3P58005 492 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 GRIN1Q05586 938 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 MTMR1Q13613 665 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 DDB1Q16531 1140 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 RGL3Q3MIN7 710 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 FSTL4Q6MZW2 842 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 CC2D1AQ6P1N0 951 aaPredicted RBP5.36□□□□□ -1.55
SVIP-203ENST00000529848 ZC3H14Q6PJT7 736 aaKnown RBP5.36□□□□□ -1.55
SVIP-203ENST00000529848 CNTD1Q8N815 330 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 SLC5A5Q92911 643 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 KLHL42Q9P2K6 505 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 TELO2Q9Y4R8 837 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 B3GALT1Q9Y5Z6 326 aa5.36□□□□□ -1.55
SVIP-203ENST00000529848 BUB1BO60566 1050 aaPredicted RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 PRKD3O94806 890 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 CYP17A1P05093 508 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 LSP1P33241 339 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 PRR5P85299 388 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 CBLL1Q75N03 491 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 ZSWIM9Q86XI8 627 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 ARRDC4Q8NCT1 418 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 TTLL11Q8NHH1 800 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 CLEC4DQ8WXI8 215 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 ALG3Q92685 438 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 DLG3Q92796 817 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 TSPAN17Q96FV3 270 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 ELF4Q99607 663 aaPredicted RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 KLHL14Q9P2G3 628 aa5.35□□□□□ -1.55
SVIP-203ENST00000529848 G3BP2Q9UN86 482 aaKnown RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 OAS3Q9Y6K5 1087 aaKnown RBP5.35□□□□□ -1.55
SVIP-203ENST00000529848 FAM90A27PA6NNH2 459 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 DVL2O14641 736 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 TGM5O43548 720 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 CD40P25942 277 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 SDHAP31040 664 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 FNTBP49356 437 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 PHC1P78364 1004 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 PAN2Q504Q3 1202 aaKnown RBP5.34□□□□□ -1.55
SVIP-203ENST00000529848 BROXQ5VW32 411 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 MPZL3Q6UWV2 235 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 NBPF11Q86T75 865 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 ZZZ3Q8IYH5 903 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 CLRN3Q8NCR9 226 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 JDP2Q8WYK2 163 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 AHCYL2Q96HN2 611 aaKnown RBP5.34□□□□□ -1.55
SVIP-203ENST00000529848 ASPSCR1Q9BZE9 553 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 DTLQ9NZJ0 730 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 NOC2LQ9Y3T9 749 aaKnown RBP5.34□□□□□ -1.55
SVIP-203ENST00000529848 HCFC2Q9Y5Z7 792 aa5.34□□□□□ -1.55
SVIP-203ENST00000529848 WASHC2AQ641Q2 1341 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms