RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 KATNAL1Q9BW62 490 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 UPF3BQ9BZI7 483 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 BCAS3Q9H6U6 928 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 VAT1LQ9HCJ6 419 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ALG13Q9NP73 1137 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PRKAG3Q9UGI9 489 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PCDHGC5Q9Y5F6 944 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 MICAL3Q7RTP6 2002 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 EMSYQ7Z589 1322 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 GVINP1Q7Z2Y8 2422 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 B4DLN1 442 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 CFBP00751 764 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 NR3C2P08235 984 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SMIM10L2AP0DMW4 78 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SMIM10L2BP0DMW5 78 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 MS4A1P11836 297 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SP100P23497 879 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 MRPL12P52815 198 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SP2Q02086 613 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SP4Q02446 784 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SMAD4Q13485 552 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 LAMC2Q13753 1193 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 COL19A1Q14993 1142 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 QRICH1Q2TAL8 776 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TRIM67Q6ZTA4 783 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ADGRD2Q7Z7M1 963 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 RBM23Q86U06 439 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SERINC5Q86VE9 423 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TRIM50Q86XT4 487 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TBC1D10CQ8IV04 446 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SUGP1Q8IWZ8 645 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 FIBCD1Q8N539 461 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 NSUN6Q8TEA1 469 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SEPT8Q92599 483 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 EDAQ92838 391 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TOP1MTQ969P6 601 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 FAM227BQ96M60 508 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SAMD11Q96NU1 681 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 KCNH6Q9H252 994 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PXMP2Q9NR77 195 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 CD207Q9UJ71 328 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TELO2Q9Y4R8 837 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 NEDD4P46934 1319 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 A0A0D9SFI3 127 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 FGAP02671 866 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 GHRP10912 638 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 UBA1P22314 1058 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 DNAJB1P25685 340 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 HOXA13P31271 388 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RBM10P98175 930 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 CTC1Q2NKJ3 1217 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 PAN2Q504Q3 1202 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 UTP14CQ5TAP6 766 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 MYSM1Q5VVJ2 828 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ZNF589Q86UQ0 364 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ADGRF4Q8IZF3 695 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ATOH1Q92858 354 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 EMID1Q96A84 441 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RPGRIP1Q96KN7 1286 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 POP1Q99575 1024 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 C11orf84Q9BUA3 381 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 SETD4Q9NVD3 440 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ANAPC4Q9UJX5 808 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 BARX2Q9UMQ3 279 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ATG2AQ2TAZ0 1938 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ABCB11O95342 1321 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ADGRA3Q8IWK6 1321 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 NCOR2Q9Y618 2525 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 H0Y858 1186 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 PPFIA3O75145 1194 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 EIF3JO75822 258 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 PDGFBP01127 241 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 LGALS2P05162 132 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 LINC00271P0C7V0 271 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 BMPR1AP36894 532 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 NRIP1P48552 1158 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 GATMP50440 423 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ZXDAP98168 799 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ARHGAP4P98171 946 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 CAMK1Q14012 370 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 BTG3Q14201 252 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 CELF3Q5SZQ8 465 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RUFY4Q6ZNE9 571 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RGS22Q8NE09 1264 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 ZBTB10Q96DT7 871 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 IWS1Q96ST2 819 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 PDCD2LQ9BRP1 358 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 C16orf70Q9BSU1 422 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 RNPEPQ9H4A4 650 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 DCTPP1Q9H773 170 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 MLXIPQ9HAP2 919 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 TLR9Q9NR96 1032 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 CLEC1BQ9P126 229 aa4.11□□□□□ -1.75
PTPRC-213ENST00000529828 USP15Q9Y4E8 981 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 MRPL42Q9Y6G3 142 aaKnown RBP4.11□□□□□ -1.75
PTPRC-213ENST00000529828 CCDC171Q6TFL3 1326 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms