RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CAPN2P17655 700 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 DDIT3P35638 169 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 ACLYP53396 1101 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 ORC2Q13416 577 aaPredicted RBP15.83■□□□□ 0.12
USF1-209ENST00000529476 BRDTQ58F21 947 aaPredicted RBP15.83■□□□□ 0.12
USF1-209ENST00000529476 DEFB123Q8N688 67 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 PCSK9Q8NBP7 692 aaKnown RBP15.83■□□□□ 0.12
USF1-209ENST00000529476 FERMT2Q96AC1 680 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 FAM20AQ96MK3 541 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 MTMR9Q96QG7 549 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
USF1-209ENST00000529476 TEKT3Q9BXF9 490 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.83■□□□□ 0.12
USF1-209ENST00000529476 PHF24Q9UPV7 400 aa15.83■□□□□ 0.12
USF1-209ENST00000529476 GSTTP1A0A1W2PQM5 241 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 ZEB2O60315 1214 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 EVI5O60447 810 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
USF1-209ENST00000529476 BRD1O95696 1058 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 HOXD8P13378 290 aaPredicted RBP15.82■□□□□ 0.12
USF1-209ENST00000529476 ACTR2P61160 394 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 DGKDQ16760 1214 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 CXCL17Q6UXB2 119 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 C4orf32Q8N8J7 132 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 PAWRQ96IZ0 340 aaKnown RBP15.82■□□□□ 0.12
USF1-209ENST00000529476 UNC45AQ9H3U1 944 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 WDR81Q562E7 1941 aa15.82■□□□□ 0.12
USF1-209ENST00000529476 A0A1W2PQ45 241 aaPredicted RBP15.81■□□□□ 0.12
USF1-209ENST00000529476 A0A1W2PQY0 241 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 MOXD2PA6NHM9 499 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 CHMP2AO43633 222 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 ELP1O95163 1332 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 OR52Z1P0C646 297 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 ZNF286BP0CG31 522 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 TCF7P36402 384 aaPredicted RBP15.81■□□□□ 0.12
USF1-209ENST00000529476 TXKP42681 527 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
USF1-209ENST00000529476 KRT76Q01546 638 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 PTGDRQ13258 359 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 ZNF746Q6NUN9 644 aaPredicted RBP15.81■□□□□ 0.12
USF1-209ENST00000529476 SLFN12Q8IYM2 578 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 SEPT1Q8WYJ6 367 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
USF1-209ENST00000529476 POLR3EQ9NVU0 708 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 TCEAL9Q9UHQ7 104 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 VAV3Q9UKW4 847 aa15.81■□□□□ 0.12
USF1-209ENST00000529476 KPNA6O60684 536 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 LGALS2P05162 132 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 COL6A1P12109 1028 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 FOXD4L6Q3SYB3 417 aaPredicted RBP15.8■□□□□ 0.12
USF1-209ENST00000529476 UTP14CQ5TAP6 766 aaKnown RBP15.8■□□□□ 0.12
USF1-209ENST00000529476 B3GNT9Q6UX72 402 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 FOXD4L3Q6VB84 417 aaPredicted RBP15.8■□□□□ 0.12
USF1-209ENST00000529476 TRIM50Q86XT4 487 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 SENP6Q9GZR1 1112 aaPredicted RBP15.8■□□□□ 0.12
USF1-209ENST00000529476 C11orf49Q9H6J7 331 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 TTC12Q9H892 705 aaPredicted RBP15.8■□□□□ 0.12
USF1-209ENST00000529476 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
USF1-209ENST00000529476 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 ATG7O95352 703 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 SUPT20HL2P0C7V6 817 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 PSMC6P62333 389 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
USF1-209ENST00000529476 SPIRE1Q08AE8 756 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 SF3A1Q15459 793 aaKnown RBP15.79■□□□□ 0.12
USF1-209ENST00000529476 GPR153Q6NV75 609 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
USF1-209ENST00000529476 KAT2BQ92831 832 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 PCYT2Q99447 389 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 GDF15Q99988 308 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 C16orf70Q9BSU1 422 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 MTG1Q9BT17 334 aaPredicted RBP15.79■□□□□ 0.12
USF1-209ENST00000529476 MTMR10Q9NXD2 777 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 SAMM50Q9Y512 469 aa15.79■□□□□ 0.12
USF1-209ENST00000529476 WDR64B1ANS9 1081 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 EML1O00423 815 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 LGR5O75473 907 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 CABYRO75952 493 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 SFNP31947 248 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 JAK3P52333 1124 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 CHMP4BP1P59074 171 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 ATP2C1P98194 919 aaPredicted RBP15.78■□□□□ 0.12
USF1-209ENST00000529476 NCAPH2Q6IBW4 605 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 MIS18BP1Q6P0N0 1132 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 PPP1R13LQ8WUF5 828 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 VTI1AQ96AJ9 217 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 IPO9Q96P70 1041 aaKnown RBP15.78■□□□□ 0.12
USF1-209ENST00000529476 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 STARD7Q9NQZ5 370 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 PCDHA10Q9Y5I2 948 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms