RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	LAMC2	Q13753	1193 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	HSDL1	Q3SXM5	330 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	KIAA0319	Q5VV43	1072 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	TMEM57	Q8N5G2	664 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	RASGRP4	Q8TDF6	673 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	CDCA3	Q99618	268 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	RNPEP	Q9H4A4	650 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	IL17RB	Q9NRM6	502 aa		13.87	□□□□□ -0.19
PSMD13-209	ENST00000529372	TSPY3	P0CV98	308 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	TSPY8	P0CW00	308 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	SMIM10L2A	P0DMW4	78 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	SMIM10L2B	P0DMW5	78 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	TEC	P42680	631 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	NOV	P48745	357 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	TFAP4	Q01664	338 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	SYDE2	Q5VT97	1194 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	TBC1D5	Q92609	795 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	CLUAP1	Q96AJ1	413 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	RTP3	Q9BQQ7	232 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	ERVK-5	Q9HDB9	667 aa		13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	ASH1L	Q9NR48	2969 aa	Known RBP	13.86	□□□□□ -0.19
PSMD13-209	ENST00000529372	NMT2	O60551	498 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	GHR	P10912	638 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	ADAM17	P78536	824 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	LPIN1	Q14693	890 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	MYSM1	Q5VVJ2	828 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	ERC1	Q8IUD2	1116 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	ZDHHC14	Q8IZN3	488 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	RHPN1	Q8TCX5	695 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	TAAR1	Q96RJ0	339 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	HINFP	Q9BQA5	517 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	BOLA2	Q9H3K6	86 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	WDR19	Q8NEZ3	1342 aa		13.85	□□□□□ -0.19
PSMD13-209	ENST00000529372	FSD2	A1L4K1	749 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	DCDC2B	A2VCK2	349 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372		B4DLN1	442 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	HOXB8	P17481	243 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	GATM	P50440	423 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	MRPL12	P52815	198 aa	Known RBP	13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	UBE3A	Q05086	875 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	MGAT3	Q09327	533 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	RGS22	Q8NE09	1264 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	RIN2	Q8WYP3	895 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	ZNF287	Q9HBT7	754 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	LIMD1	Q9UGP4	676 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	STX8	Q9UNK0	236 aa		13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.84	□□□□□ -0.19
PSMD13-209	ENST00000529372	PPFIA3	O75145	1194 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	ATP5J	P18859	108 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	CCDC96	Q2M329	555 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	PAN2	Q504Q3	1202 aa	Known RBP	13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	CEP85	Q6P2H3	762 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	DCAF4	Q8WV16	495 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	OSBP2	Q969R2	916 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372	ADAM7	Q9H2U9	754 aa		13.83	□□□□□ -0.2
PSMD13-209	ENST00000529372		H3BRB1	525 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	SP9	P0CG40	484 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	SP2	Q02086	613 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	STXBP2	Q15833	593 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	CELF3	Q5SZQ8	465 aa	Known RBP	13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	LLGL2	Q6P1M3	1020 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	MICAL1	Q8TDZ2	1067 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	NSUN6	Q8TEA1	469 aa	Known RBP	13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	NECTIN4	Q96NY8	510 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	IWS1	Q96ST2	819 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	TUT1	Q9H6E5	874 aa	Known RBP	13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	SETD4	Q9NVD3	440 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	MTMR7	Q9Y216	660 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	MRVI1	Q9Y6F6	885 aa		13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	SMG1	Q96Q15	3661 aa	Known RBP	13.82	□□□□□ -0.2
PSMD13-209	ENST00000529372	DENND4A	Q7Z401	1863 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	HIDE1	A8MVS5	230 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	SORBS3	O60504	671 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	SDHB	P21912	280 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	TGM1	P22735	817 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	SIX5	Q8N196	739 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	FEZF2	Q8TBJ5	459 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	SPATA33	Q96N06	139 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	BCAS3	Q9H6U6	928 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	AGO3	Q9H9G7	860 aa	Known RBP	13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	DLGAP2	Q9P1A6	1054 aa		13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	DSP	P15924	2871 aa	Known RBP	13.81	□□□□□ -0.2
PSMD13-209	ENST00000529372	HELZ2	Q9BYK8	2649 aa	Known RBP	13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	IPO8	O15397	1037 aa	Known RBP	13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	EIF3J	O75822	258 aa	Known RBP	13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	FGF18	O76093	207 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	LGALS2	P05162	132 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	WEE2	P0C1S8	567 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	TDO2	P48775	406 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	APOBR	Q0VD83	1088 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	FBXO47	Q5MNV8	452 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	NPAS4	Q8IUM7	802 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	TDRD5	Q8NAT2	981 aa	Known RBP	13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	RMDN3	Q96TC7	470 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	GPCPD1	Q9NPB8	672 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms