RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 LCP1P13796 627 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 GTF2A2P52657 109 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 SLC9A5Q14940 896 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 TCEA2Q15560 299 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 EGFLAMQ63HQ2 1017 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 LBX2Q6XYB7 198 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 USP53Q70EK8 1073 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 NLRP10Q86W26 655 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 MARCH10Q8NA82 808 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-212ENST00000529046 PLEKHO2Q8TD55 490 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
CSDE1-212ENST00000529046 KCNC2Q96PR1 638 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 FEZ1Q99689 392 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 PARD6AQ9NPB6 346 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 BTG4Q9NY30 223 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 SIGLEC1Q9BZZ2 1709 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 RIMS1Q86UR5 1692 aaKnown RBP6.87□□□□□ -1.31
CSDE1-212ENST00000529046 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 PPP1R12AO14974 1030 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-212ENST00000529046 MSCO60682 206 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 EFCAB14O75071 495 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 ZBTB7AO95365 584 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 NTRK1P04629 796 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 ATF2P15336 505 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 PMLP29590 882 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 GPR85P60893 370 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 VMACQ2NL98 169 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 KCNT2Q6UVM3 1135 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 DCP2Q8IU60 420 aaKnown RBP6.86□□□□□ -1.31
CSDE1-212ENST00000529046 SLC7A14Q8TBB6 771 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 CLUHP3Q96NS8 147 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 SLC52A2Q9HAB3 445 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 FBXL7Q9UJT9 491 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 TIMM13Q9Y5L4 95 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-212ENST00000529046 X6R8D5 127 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 ABCC1P33527 1531 aa6.86□□□□□ -1.31
CSDE1-212ENST00000529046 CNTLNQ9NXG0 1405 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 TRAPPC8Q9Y2L5 1435 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 CDC42BPBQ9Y5S2 1711 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 ARVCFO00192 962 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 AQP7O14520 342 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-212ENST00000529046 ASMTLO95671 621 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 HOXA5P20719 270 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 MC3RP41968 323 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 RPL11P62913 178 aaKnown RBP6.85□□□□□ -1.31
CSDE1-212ENST00000529046 FOXO4P98177 505 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 LILRA6Q6PI73 481 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 RIOX2Q8IUF8 465 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 TEX2Q8IWB9 1127 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 SCLYQ96I15 445 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 PREX2Q70Z35 1606 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 SETD1BQ9UPS6 1966 aaKnown RBP6.85□□□□□ -1.31
CSDE1-212ENST00000529046 PLEKHH2Q8IVE3 1493 aa6.85□□□□□ -1.31
CSDE1-212ENST00000529046 LRRIQ1Q96JM4 1722 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 DIP2CQ9Y2E4 1556 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 C22orf46C9J442 243 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 H7BY64 318 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 MYO1BO43795 1136 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 SASH1O94885 1247 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 HSPA2P54652 639 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 CAP1Q01518 475 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 LSAMPQ13449 338 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 IFNL3Q8IZI9 196 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 AP5M1Q9H0R1 490 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 INTS7Q9NVH2 962 aaKnown RBP6.84□□□□□ -1.31
CSDE1-212ENST00000529046 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 PLAAQ9Y263 795 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 SIT1Q9Y3P8 196 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 GPATCH8Q9UKJ3 1502 aaKnown RBP6.84□□□□□ -1.31
CSDE1-212ENST00000529046 FER1L4A9Z1Z3 1794 aa6.84□□□□□ -1.31
CSDE1-212ENST00000529046 NAT1P18440 290 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 CTSWP56202 376 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 KIZQ2M2Z5 673 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 DALRD3Q5D0E6 543 aaKnown RBP6.83□□□□□ -1.32
CSDE1-212ENST00000529046 HABP4Q5JVS0 413 aaKnown RBP6.83□□□□□ -1.32
CSDE1-212ENST00000529046 B3GNT8Q7Z7M8 397 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 SP8Q8IXZ3 490 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 NINJ1Q92982 152 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 TRAF6Q9Y4K3 522 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 CD2APQ9Y5K6 639 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 NPATQ14207 1427 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 UHRF1BP1Q6BDS2 1440 aa6.83□□□□□ -1.32
CSDE1-212ENST00000529046 SPAG9O60271 1321 aaKnown RBP6.82□□□□□ -1.32
CSDE1-212ENST00000529046 PREX1Q8TCU6 1659 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 FAM83GA6ND36 823 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 FFAR3O14843 346 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CSDE1-212ENST00000529046 KCNA6P17658 529 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 FPR2P25090 351 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 BCL6P41182 706 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 PABPC4Q13310 644 aaKnown RBP eCLIP6.82□□□□□ -1.321e-13■■□□□ 12
CSDE1-212ENST00000529046 MROH9Q5TGP6 573 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 CEP68Q76N32 757 aa6.82□□□□□ -1.32
CSDE1-212ENST00000529046 BRAPQ7Z569 592 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms