RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TJAP1Q5JTD0 557 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 UTP14CQ5TAP6 766 aaKnown RBP16.24■□□□□ 0.19
CAPN1-212ENST00000527887 TAF2Q6P1X5 1199 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 SETD4Q9NVD3 440 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 PSMA5P28066 241 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN1-212ENST00000527887 ADCY7P51828 1080 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 TAP1Q03518 808 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 MBTPS1Q14703 1052 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 PLEKHG4Q58EX7 1191 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 FAM26DQ5JW98 314 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 SEPT8Q92599 483 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 MXRA8Q9BRK3 442 aa16.23■□□□□ 0.19
CAPN1-212ENST00000527887 FAM217BQ9NTX9 383 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-212ENST00000527887 TANC1Q9C0D5 1861 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 NFASCO94856 1347 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 STXBP3O00186 592 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 AMHP03971 560 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 NIPA1Q7RTP0 329 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 RSPH3Q86UC2 560 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 DBF4BQ8NFT6 615 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 CCDC12Q8WUD4 166 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-212ENST00000527887 APBB2Q92870 758 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 JPH1Q9HDC5 661 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-212ENST00000527887 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 LMCD1Q9NZU5 365 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 THEGQ9P2T0 379 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 INSL6Q9Y581 213 aa16.22■□□□□ 0.19
CAPN1-212ENST00000527887 SPTBN5Q9NRC6 3674 aaKnown RBP16.22■□□□□ 0.19
CAPN1-212ENST00000527887 RRN3P2A6NIE6 340 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 CDC27P30260 824 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 ADD1P35611 737 aaKnown RBP16.21■□□□□ 0.19
CAPN1-212ENST00000527887 SREBF1P36956 1147 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
CAPN1-212ENST00000527887 DEFB103AP81534 67 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 SP4Q02446 784 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 PFKFB3Q16875 520 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-212ENST00000527887 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 Q6ZUG5 572 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 TRIM50Q86XT4 487 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 LMBR1Q8WVP7 490 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 PPM1EQ8WY54 764 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 GLG1Q92896 1179 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
CAPN1-212ENST00000527887 SDF4Q9BRK5 362 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 AZI2Q9H6S1 392 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 SLC9A2Q9UBY0 812 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
CAPN1-212ENST00000527887 MYH7BA7E2Y1 1941 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 SCN5AQ14524 2016 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 ESYT2A0FGR8 921 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 MEIS1O00470 390 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 SCG2P13521 617 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 MRPS5P82675 430 aaKnown RBP16.2■□□□□ 0.18
CAPN1-212ENST00000527887 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-212ENST00000527887 PLPPR4Q7Z2D5 763 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 ANO3Q9BYT9 981 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-212ENST00000527887 MTCH2Q9Y6C9 303 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 NID2Q14112 1375 aa16.2■□□□□ 0.18
CAPN1-212ENST00000527887 MBLAC1A4D2B0 266 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 GNA11P29992 359 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 SLC26A2P50443 739 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 ERVK-21P61565 698 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 CCDC85BQ15834 202 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 AAK1Q2M2I8 961 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 TCTN1Q2MV58 587 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 BRF1Q92994 677 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 ASB2Q96Q27 587 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 TGS1Q96RS0 853 aaKnown RBP16.19■□□□□ 0.18
CAPN1-212ENST00000527887 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 TELO2Q9Y4R8 837 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 TTC28Q96AY4 2481 aa16.19■□□□□ 0.18
CAPN1-212ENST00000527887 TET1Q8NFU7 2136 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 CYP3A4P08684 503 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 ZNF76P36508 570 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 EVCP57679 992 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 HTRA4P83105 476 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-212ENST00000527887 APOBRQ0VD83 1088 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 GRIK4Q16099 956 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 BICD2Q8TD16 824 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 SAMD11Q96NU1 681 aa16.18■□□□□ 0.18
CAPN1-212ENST00000527887 CERS4Q9HA82 394 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms