RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 DEF6Q9H4E7 631 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 PCDHA13Q9Y5I0 950 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 ZNF263O14978 683 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 CETN3O15182 167 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 PLA2G6O60733 806 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 EIF4A3P38919 411 aaKnown RBP16.95■□□□□ 0.3
USH1C-207ENST00000527720 LONRF2Q1L5Z9 754 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 PSMD1Q99460 953 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 FUT8Q9BYC5 575 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 FGFBP2Q9BYJ0 223 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 TBC1D7Q9P0N9 293 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 TRAF3IP3Q9Y228 551 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
USH1C-207ENST00000527720 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
USH1C-207ENST00000527720 ZNF76P36508 570 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 CYP27A1Q02318 531 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 TERF2Q15554 542 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
USH1C-207ENST00000527720 SH2D4AQ9H788 454 aa16.95■□□□□ 0.3
USH1C-207ENST00000527720 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
USH1C-207ENST00000527720 ENC1O14682 589 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 PJA2O43164 708 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 AKR1B10O60218 316 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 TBC1D12O60347 775 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 TACC1O75410 805 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 PLEKP08567 350 aaPredicted RBP16.94■□□□□ 0.3
USH1C-207ENST00000527720 ADAM9Q13443 819 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 EPM2AIP1Q7L775 607 aaPredicted RBP16.94■□□□□ 0.3
USH1C-207ENST00000527720 NELFCDQ8IXH7 590 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 CHURC1Q8WUH1 139 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 GMLQ99445 158 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 TFR2Q9UP52 801 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 C21orf2O43822 256 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 SASH3O75995 380 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 EYA4O95677 639 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 RXRBP28702 533 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 BMT2Q1RMZ1 405 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
USH1C-207ENST00000527720 SPDYE2Q495Y8 402 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 WDR93Q6P2C0 686 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 UIMC1Q96RL1 719 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 PNKPQ96T60 521 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 RANBP17Q9H2T7 1088 aaKnown RBP16.94■□□□□ 0.3
USH1C-207ENST00000527720 EHMT1Q9H9B1 1298 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 JRKLQ9Y4A0 524 aa16.94■□□□□ 0.3
USH1C-207ENST00000527720 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 PDXKO00764 312 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 MAP2K7O14733 419 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 MUTP22033 750 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 MCM3P25205 808 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 PSMC6P62333 389 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
USH1C-207ENST00000527720 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 BEND6Q5SZJ8 279 aaPredicted RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 FRMD5Q7Z6J6 570 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 TUFT1Q9NNX1 390 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 CALUO43852 315 aaPredicted RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 NOL4O94818 638 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 PRLRP16471 622 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 ECE1P42892 770 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 FAM83BQ5T0W9 1011 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 HGSNATQ68CP4 663 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
USH1C-207ENST00000527720 HDAC6Q9UBN7 1215 aa16.93■□□□□ 0.3
USH1C-207ENST00000527720 MYH11P35749 1972 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 GCOM1H8Y6P7 765 aaPredicted RBP16.92■□□□□ 0.3
USH1C-207ENST00000527720 TFRCP02786 760 aaKnown RBP16.92■□□□□ 0.3
USH1C-207ENST00000527720 SERPING1P05155 500 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 POLR2MP0CAP2 368 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 GAP43P17677 238 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 RAD51AP2Q09MP3 1159 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 MTMR14Q8NCE2 650 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 ALS2CR12Q96Q35 445 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 LUC7LQ9NQ29 371 aaKnown RBP16.92■□□□□ 0.3
USH1C-207ENST00000527720 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
USH1C-207ENST00000527720 RABGAP1Q9Y3P9 1069 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms