RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 HAS3O00219 553 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 BACH1O14867 736 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 CSF2RAP15509 400 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 KRT2P35908 639 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 ACTR2P61160 394 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 ITGB3BPQ13352 177 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-209ENST00000527469 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
CAPN1-209ENST00000527469 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-209ENST00000527469 CRYGNQ8WXF5 182 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 TNPO1Q92973 898 aaKnown RBP15.18■□□□□ 0.02
CAPN1-209ENST00000527469 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 ERAP1Q9NZ08 941 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 DOCK5Q9H7D0 1870 aa15.18■□□□□ 0.02
CAPN1-209ENST00000527469 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 MARK3P27448 753 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 CIITAP33076 1130 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 HMGN5P82970 282 aaKnown RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 INF2Q27J81 1249 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 FAM160B1Q5W0V3 765 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 ATP6V0A1Q93050 837 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 NAP1L4Q99733 375 aaKnown RBP15.17■□□□□ 0.02
CAPN1-209ENST00000527469 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
CAPN1-209ENST00000527469 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 MARCH6O60337 910 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 MCM2P49736 904 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 GNL2Q13823 731 aaKnown RBP15.16■□□□□ 0.02
CAPN1-209ENST00000527469 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 MIS18BP1Q6P0N0 1132 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 MTIF3Q9H2K0 278 aaKnown RBP15.16■□□□□ 0.02
CAPN1-209ENST00000527469 IL23AQ9NPF7 189 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 TELO2Q9Y4R8 837 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
CAPN1-209ENST00000527469 M0R2N6 131 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 GAS7O60861 476 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 RFC2P35250 354 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 KRT76Q01546 638 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 PPFIA1Q13136 1202 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 PTK7Q13308 1070 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 SHHQ15465 462 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 NPY5RQ15761 445 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 CKAP2LQ8IYA6 745 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 SCLYQ96I15 445 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 SETD4Q9NVD3 440 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 DDX25Q9UHL0 483 aaKnown RBP15.15■□□□□ 0.02
CAPN1-209ENST00000527469 NRCAMQ92823 1304 aa15.15■□□□□ 0.02
CAPN1-209ENST00000527469 MSH4O15457 936 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 CCNT1O60563 726 aaKnown RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 TDP2O95551 362 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 MMP1P03956 469 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 PSAPP07602 524 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 ACRP10323 421 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 SELPP16109 830 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 THPOP40225 353 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 SLC26A2P50443 739 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 STAT5BP51692 787 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 EPHB4P54760 987 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 LRIT3Q3SXY7 679 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 Q4G0T1 1027 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 KRT40Q6A162 431 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 SMAP1Q8IYB5 467 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 FTOQ9C0B1 505 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN1-209ENST00000527469 WNT8AQ9H1J5 351 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 RNPEPQ9H4A4 650 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
CAPN1-209ENST00000527469 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 WDR64B1ANS9 1081 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 CHMP2AO43633 222 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 LGR5O75473 907 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 CCNE2O96020 404 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 FGBP02675 491 aa15.13■□□□□ 0.01
CAPN1-209ENST00000527469 PFKMP08237 780 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms