RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-208ENST00000527323 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
CAPN1-208ENST00000527323 TRAF5O00463 557 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 SSBP05455 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 EHHADHQ08426 723 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 RNF187Q5TA31 235 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 SFMBT2Q5VUG0 894 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 DLK2Q6UY11 383 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 ZMYND12Q9H0C1 365 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 USP40Q9NVE5 1235 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 PACSIN2Q9UNF0 486 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 MYH10P35580 1976 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 ARAP2Q8WZ64 1704 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 MARCH6O60337 910 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 LCA5LO95447 670 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 EGFRP00533 1210 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 SKOR1P84550 965 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 CALCRLQ16602 461 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 USP17L2Q6R6M4 530 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 BAP1Q92560 729 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 RTFDC1Q9BY42 306 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-208ENST00000527323 GJA3Q9Y6H8 435 aa13.76□□□□□ -0.21
CAPN1-208ENST00000527323 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 IL1R1P14778 569 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 GRB10Q13322 594 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 HLTFQ14527 1009 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 GUF1Q8N442 669 aaKnown RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 PJA2O43164 708 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 HNRNPH1P31943 449 aaKnown RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 PRAMEF18Q5VWM3 479 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 UBA5Q9GZZ9 404 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 RNF14Q9UBS8 474 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 RGL2O15211 777 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 APBA1Q02410 837 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 LRRC63Q05C16 580 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 RAPGEF1Q13905 1077 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 GLIS3Q8NEA6 775 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 ANKS1AQ92625 1134 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 TAF4BQ92750 862 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 DDX12PQ92771 950 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 LSM14BQ9BX40 385 aaKnown RBP13.75□□□□□ -0.21
CAPN1-208ENST00000527323 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 TBC1D7Q9P0N9 293 aa13.75□□□□□ -0.21
CAPN1-208ENST00000527323 SSU72P8A0A1W2PR75 194 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 HPDP32754 393 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-208ENST00000527323 USP8P40818 1118 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
CAPN1-208ENST00000527323 IQCKQ8N0W5 287 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 PIGSQ96S52 555 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 SCN9AQ15858 1988 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 POTEMA6NI47 508 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 GOLGA6L10A6NI86 522 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 NR1D1P20393 614 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 LSP1P33241 339 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 CEP85LQ5SZL2 805 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 MICALCLQ6ZW33 695 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 GPATCH11Q8N954 259 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 STK17AQ9UEE5 414 aa13.74□□□□□ -0.21
CAPN1-208ENST00000527323 SERPING1P05155 500 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 KLRC1P26715 233 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 TNFRSF8P28908 595 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 EPS15P42566 896 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-208ENST00000527323 KCNMA1Q12791 1236 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 TRADDQ15628 312 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 ASTE1Q2TB18 679 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-208ENST00000527323 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 PRMT6Q96LA8 375 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-208ENST00000527323 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 ADAMTS1Q9UHI8 967 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 BAG3O95817 575 aa13.73□□□□□ -0.21
CAPN1-208ENST00000527323 SEC24CP53992 1094 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms