RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 PANK4Q9NVE7 773 aa13.23□□□□□ -0.29
CHMP1B-201ENST00000526991 VAV2P52735 878 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 COASYQ13057 564 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 EIF3JO75822 258 aaKnown RBP13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 NDUFB10O96000 172 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 PKD2L1Q9P0L9 805 aa13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
CHMP1B-201ENST00000526991 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 LRRC1Q9BTT6 524 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 RAB34Q9BZG1 259 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 DLGAP5Q15398 846 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 MAN2A1Q16706 1144 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 CUL5Q93034 780 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 GOLPH3Q9H4A6 298 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 FAM204AQ9H8W3 233 aa13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.29
CHMP1B-201ENST00000526991 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 ZBTB5O15062 677 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 FTCDO95954 541 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 TUBB2AQ13885 445 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 PRR16Q569H4 304 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 PAPD7Q5XG87 772 aaKnown RBP13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 OGFOD1Q8N543 542 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.3
CHMP1B-201ENST00000526991 TACC1O75410 805 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 ACTN1P12814 892 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 PSMC6P62333 389 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 PABPC4Q13310 644 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■■■□ 20.1
CHMP1B-201ENST00000526991 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 CCDC170Q8IYT3 715 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 MTMR8Q96EF0 704 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 TSG101Q99816 390 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 CFBP00751 764 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 LCMT1Q9UIC8 334 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
CHMP1B-201ENST00000526991 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 CHMP2AO43633 222 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 RNF40O75150 1001 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 CASP5P51878 434 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 PRKG1Q13976 671 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 GGCXP38435 758 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 EPS15P42566 896 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SLC20A2Q08357 652 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 CREG2Q8IUH2 290 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 PACSIN1Q9BY11 444 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 ZSCAN5CA6NGD5 496 aaPredicted RBP13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 MED24O75448 989 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms