RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NCAPHQ15003 741 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 SKIDA1Q1XH10 827 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 SV2CQ496J9 727 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 C1orf210Q8IVY1 113 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 PIP4K2CQ8TBX8 421 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 JAM3Q9BX67 310 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 KATNBL1Q9H079 304 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 KCND1Q9NSA2 647 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 A0A087X1B8 175 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 KRIT1O00522 736 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 MAFKO60675 156 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 CHGBP05060 677 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 GFRA1P56159 465 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 TRIM48Q8IWZ4 208 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 REXO1L1PQ8IX06 675 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 TMEM145Q8NBT3 493 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 TTLL11Q8NHH1 800 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 IL17DQ8TAD2 202 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 ARHGAP20Q9P2F6 1191 aa4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-219ENST00000526299 RAD17O75943 681 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 IL18BPO95998 194 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 LTFP02788 710 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 INHBCP55103 352 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 RAC3P60763 192 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 PFKPQ01813 784 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 USP10Q14694 798 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 NOLC1Q14978 699 aaKnown RBP eCLIP4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 PAN2Q504Q3 1202 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 METTL16Q86W50 562 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 DNAJC10Q8IXB1 793 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 C1orf159Q96HA4 380 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
ECHDC1-219ENST00000526299 H0Y858 1186 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 FAHP16930 419 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 TUSC3Q13454 348 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 RNF151Q2KHN1 245 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 ZNF568Q3ZCX4 644 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 C6orf15Q6UXA7 325 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 POLNQ7Z5Q5 900 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 CACTINQ8WUQ7 758 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 SEC16BQ96JE7 1060 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 DPYSL5Q9BPU6 564 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 TACO1Q9BSH4 297 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 OAZ3Q9UMX2 235 aa4.76□□□□□ -1.65
ECHDC1-219ENST00000526299 B2RBV5 119 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 MSCO60682 206 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 ENO2P09104 434 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 CR2P20023 1033 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 GJA8P48165 433 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 SLC35F1Q5T1Q4 408 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 FNDC7Q5VTL7 733 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 CD276Q5ZPR3 534 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 MAMDC4Q6UXC1 1216 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 LDLRAD3Q86YD5 345 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 NT5DC4Q86YG4 428 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 OR14A2Q96R54 314 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 CARD11Q9BXL7 1154 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 TELO2Q9Y4R8 837 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 NPFFR2Q9Y5X5 522 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 SLC30A1Q9Y6M5 507 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 PCSK5Q92824 1860 aa4.75□□□□□ -1.65
ECHDC1-219ENST00000526299 ZNF839A8K0R7 811 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 U2SURPO15042 1029 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 CDC14BO60729 498 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 RECKO95980 971 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 COL6A2P12110 1019 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 RRADP55042 308 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 ZNF808Q8N4W9 903 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 LARP4BQ92615 738 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 ZG16BQ96DA0 208 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 FAM89AQ96GI7 184 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 MMRN2Q9H8L6 949 aa4.74□□□□□ -1.65
ECHDC1-219ENST00000526299 ESYT3A0FGR9 886 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 SUSD5O60279 629 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 ACRV1P26436 265 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 DUSP8Q13202 625 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 TUBA3CQ13748 450 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 LARP1BQ659C4 914 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 TUBA3EQ6PEY2 450 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 OTOP3Q7RTS5 596 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 FAM178BQ8IXR5 827 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 PLA2G12BQ9BX93 195 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 MRVI1Q9Y6F6 885 aa4.73□□□□□ -1.65
ECHDC1-219ENST00000526299 MATN2O00339 956 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 SMAD7O15105 426 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 DDAH1O94760 285 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 ADH4P08319 380 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 POLD1P28340 1107 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 GRIA2P42262 883 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 HDLBPQ00341 1268 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 HNRNPA0Q13151 305 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms