RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ATP6V0A1Q93050 837 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 RNPEPQ9H4A4 650 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 SMARCAD1Q9H4L7 1026 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 SLC9A2Q9UBY0 812 aa21.02■□□□□ 0.96
TSPAN4-216ENST00000526055 NRCAMQ92823 1304 aa21.02■□□□□ 0.95
TSPAN4-216ENST00000526055 GSTTP1A0A1W2PQM5 241 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 CDKL5O76039 1030 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 CXCL10P02778 98 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 CYP2W1Q8TAV3 490 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 TNPO1Q92973 898 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 TIFAQ96CG3 184 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 GUCD1Q96NT3 240 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 FTOQ9C0B1 505 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 AGO4Q9HCK5 861 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 ERAP1Q9NZ08 941 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 MSRAQ9UJ68 235 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 EMSYQ7Z589 1322 aa21.01■□□□□ 0.95
TSPAN4-216ENST00000526055 LGR5O75473 907 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 ARP10275 920 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 ZNF200P98182 395 aaPredicted RBP21■□□□□ 0.95
TSPAN4-216ENST00000526055 SETQ01105 290 aaPredicted RBP21■□□□□ 0.95
TSPAN4-216ENST00000526055 HIC1Q14526 733 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 TRIM50Q86XT4 487 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 PHOSPHO2Q8TCD6 241 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 PBX4Q9BYU1 374 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 C22orf23Q9BZE7 217 aa21■□□□□ 0.95
TSPAN4-216ENST00000526055 TTYH1Q9H313 450 aaPredicted RBP21■□□□□ 0.95
TSPAN4-216ENST00000526055 TRIP12Q14669 1992 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 ZBBXA8MT70 800 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 CIITAP33076 1130 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 NLRP5P59047 1200 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 ADAM17P78536 824 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 GALNT17Q6IS24 598 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 GLG1Q92896 1179 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 SLC9A7Q96T83 725 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 AZI2Q9H6S1 392 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 PKD2L1Q9P0L9 805 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 VPS54Q9P1Q0 977 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 TELO2Q9Y4R8 837 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 UNC80Q8N2C7 3258 aa20.99■□□□□ 0.95
TSPAN4-216ENST00000526055 DOCK5Q9H7D0 1870 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 IGLV3-22A0A075B6J6 115 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 TREHO43280 583 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 EFCAB14O75071 495 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 ATP2A2P16615 1042 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 GPNMBQ14956 572 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 ZNF618Q5T7W0 954 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 CNKSR3Q6P9H4 555 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 TRAF7Q6Q0C0 670 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 PLA2G4DQ86XP0 818 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 FAM161BQ96MY7 647 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 SETD4Q9NVD3 440 aa20.98■□□□□ 0.95
TSPAN4-216ENST00000526055 SCN5AQ14524 2016 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 GRXCR1A8MXD5 290 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 PFKFB2O60825 505 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 ATG7O95352 703 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 RPLP2P05387 115 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 SLC26A2P50443 739 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 ACTR2P61160 394 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 STK3Q13188 491 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 TAF2Q6P1X5 1199 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 PLPPR4Q7Z2D5 763 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 RPAINQ86UA6 219 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 DAGLBQ8NCG7 672 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 LMBR1Q8WVP7 490 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 WNT8BQ93098 351 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 CDX2Q99626 313 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 LARP6Q9BRS8 491 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 ZNF576Q9H609 170 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 TBC1D22BQ9NU19 505 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 PCDHA4Q9UN74 947 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 PCDHA11Q9Y5I1 949 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 STK36Q9NRP7 1315 aa20.97■□□□□ 0.95
TSPAN4-216ENST00000526055 ABHD14A-ACY1A0A1B0GW23 586 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 RRN3P2A6NIE6 340 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 RSPH10B2B2RC85 870 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 NBNO60934 754 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 PPFIA3O75145 1194 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 RSPH10BP0C881 870 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 THPOP40225 353 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 USP11P51784 963 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 SCRN1Q12765 414 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 PPFIA1Q13136 1202 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 TPCN1Q9ULQ1 816 aa20.96■□□□□ 0.95
TSPAN4-216ENST00000526055 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 TET1Q8NFU7 2136 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 IPO5O00410 1097 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 XBP1P17861 261 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 PBX2P40425 430 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 AK2P54819 239 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 SLC17A8Q8NDX2 589 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 PCYT2Q99447 389 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 ZNF577Q9BSK1 485 aa20.95■□□□□ 0.94
TSPAN4-216ENST00000526055 CUL9Q8IWT3 2517 aa20.94■□□□□ 0.94
TSPAN4-216ENST00000526055 IGKV6D-21A0A0A0MT36 114 aa20.94■□□□□ 0.94
TSPAN4-216ENST00000526055 MBLAC1A4D2B0 266 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms