RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 ARHGEF28Q8N1W1 1705 aaKnown RBP8.74□□□□□ -1.01
CTNND1-211ENST00000525821 SUSD5O60279 629 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 GJB6O95452 261 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 SV2CQ496J9 727 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 TRIM59Q8IWR1 403 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 KCNH5Q8NCM2 988 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 MRGPRX3Q96LB0 322 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 NMRK2Q9NPI5 230 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 CCNL1Q9UK58 526 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-211ENST00000525821 IGSF1Q8N6C5 1336 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 COL18A1P39060 1754 aa8.73□□□□□ -1.01
CTNND1-211ENST00000525821 KLF4O43474 513 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 PEX10O60683 326 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 TOMM70O94826 608 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 ERVFRD-1P60508 538 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 MVKQ03426 396 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 MRM1Q6IN84 353 aaKnown RBP8.72□□□□□ -1.01
CTNND1-211ENST00000525821 KCNN1Q92952 543 aa8.72□□□□□ -1.01
CTNND1-211ENST00000525821 AKAP12Q02952 1782 aa8.71□□□□□ -1.01
CTNND1-211ENST00000525821 ABCC6O95255 1503 aa8.71□□□□□ -1.01
CTNND1-211ENST00000525821 MPOP05164 745 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 SDHBP21912 280 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 L1CAMP32004 1257 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 CELF2-AS1Q8N7Q2 184 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 LGR4Q9BXB1 951 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 TANGO6Q9C0B7 1094 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 ST7Q9NRC1 585 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
CTNND1-211ENST00000525821 CENPJQ9HC77 1338 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-211ENST00000525821 MYOCOSA0A1B0GUC4 107 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
CTNND1-211ENST00000525821 TSPAN15O95858 294 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 MSL3P1P0C860 447 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 GTF2IRD2BQ6EKJ0 949 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 GTF2IRD2Q86UP8 949 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 JMYQ8N9B5 988 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 LTV1Q96GA3 475 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-211ENST00000525821 CYP26B1Q9NR63 512 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 NSD2O96028 1365 aa8.7□□□□□ -1.02
CTNND1-211ENST00000525821 TRPM1Q7Z4N2 1603 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 BTAF1O14981 1849 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 TRBV23OR9-2A0A075B6M9 112 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 HRKO00198 91 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 NFIBO00712 420 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 KRT1P04264 644 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 ITGAVP06756 1048 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 PAMP19021 973 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 ATP2B1P20020 1258 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 CORO7P57737 925 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 SCRN1Q12765 414 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 DDR2Q16832 855 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNND1-211ENST00000525821 COPS5Q92905 334 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 TNFRSF12AQ9NP84 129 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 PDLIM7Q9NR12 457 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 PCNTO95613 3336 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 NFAT5O94916 1531 aa8.69□□□□□ -1.02
CTNND1-211ENST00000525821 NPHP3-ACAD11A0A0J9YXS1 232 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-211ENST00000525821 ABLIM1O14639 778 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 GLDCP23378 1020 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 YBX1P67809 324 aaKnown RBP8.68□□□□□ -1.02
CTNND1-211ENST00000525821 ZNF227Q86WZ6 799 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 NME9Q86XW9 330 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 CPNE8Q86YQ8 564 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 EPN3Q9H201 632 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 NKX2-4Q9H2Z4 354 aa8.68□□□□□ -1.02
CTNND1-211ENST00000525821 TEX51A0A1B0GUA7 166 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 A0A1W2PQJ5 194 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 SEMA7AO75326 666 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
CTNND1-211ENST00000525821 TMEM62Q0P6H9 643 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 RAB33AQ14088 237 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 CKAP2LQ8IYA6 745 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 ANKRD36BQ8N2N9 1353 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 BTN2A2Q8WVV5 523 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 GPRC5CQ9NQ84 441 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 KLHL14Q9P2G3 628 aa8.67□□□□□ -1.02
CTNND1-211ENST00000525821 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 TTC21AQ8NDW8 1320 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 TBX1O43435 398 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 HSPA1AP0DMV8 641 aaKnown RBP8.66□□□□□ -1.02
CTNND1-211ENST00000525821 HSPA1BP0DMV9 641 aaKnown RBP8.66□□□□□ -1.02
CTNND1-211ENST00000525821 PLS3P13797 630 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 HOXC12P31275 282 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 VIPR1P32241 457 aa8.66□□□□□ -1.02
CTNND1-211ENST00000525821 CBX2Q14781 532 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms