RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 NSMCE1Q8WV22 266 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 PPM1EQ8WY54 764 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 HAUS1Q96CS2 278 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 NHEJ1Q9H9Q4 299 aaPredicted RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 RIC8AQ9NPQ8 531 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 RNF146Q9NTX7 359 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 FEZ2Q9UHY8 353 aaPredicted RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 UBE2Q2LH0YL09 131 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 TLR3O15455 904 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 N4BP1O75113 896 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 KLRK1P26718 216 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 HMGCS2P54868 508 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 GNGT1P63211 74 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 TRIM28Q13263 835 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 MIS18BP1Q6P0N0 1132 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 PASD1Q8IV76 773 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD7-203ENST00000525508 NBPF3Q9H094 633 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 RGL1Q9NZL6 768 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 EFCAB8A8MWE9 144 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 SLC16A4O15374 487 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 NDUFA10O95299 355 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 SSTR3P32745 418 aaPredicted RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 SLC12A2P55011 1212 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
CHD7-203ENST00000525508 VSTM4Q8IW00 320 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 DYDC2Q96IM9 177 aa9.03□□□□□ -0.96
CHD7-203ENST00000525508 CFAP74Q9C0B2 1584 aa9.02□□□□□ -0.96
CHD7-203ENST00000525508 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.96
CHD7-203ENST00000525508 HEXIM1O94992 359 aaKnown RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 FCER1AP12319 257 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 OSBPP22059 807 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 ATP5DP30049 168 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 PPP2R5AQ15172 486 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 ZNF746Q6NUN9 644 aaPredicted RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 ALKBH5Q6P6C2 394 aaKnown RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 TBK1Q9UHD2 729 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 GLI2P10070 1586 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 SGK1O00141 431 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 CCND2P30279 289 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 INPP5BP32019 993 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 KIF11P52732 1056 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 YWHAGP61981 247 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD7-203ENST00000525508 GKAP1Q5VSY0 366 aaPredicted RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 RESP18Q5W5W9 173 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 SHC4Q6S5L8 630 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 FMR1NBQ8N0W7 255 aaPredicted RBP9.02□□□□□ -0.97
CHD7-203ENST00000525508 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 SMYD2Q9NRG4 433 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 STK38LQ9Y2H1 464 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 BNIP3LO60238 219 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 CAMTA2O94983 1202 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 ZNF18P17022 549 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
CHD7-203ENST00000525508 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 H0YCG3 227 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 ZBED6P86452 979 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TFDP1Q14186 410 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 ANKRD20A3Q5VUR7 823 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TAOK1Q7L7X3 1001 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 FAM160B2Q86V87 743 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 BCAS4Q8TDM0 211 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 MSTO1Q9BUK6 570 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 DAGLAQ9Y4D2 1042 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TET3O43151 1660 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 LRRD1A4D1F6 860 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 GAP43P17677 238 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 ZKSCAN8Q15776 578 aaPredicted RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 CCDC144BQ3MJ40 725 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 C12orf60Q5U649 245 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 FYB2Q5VWT5 728 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 ARL6IP4Q66PJ3 421 aaKnown RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 OR6B2Q6IFH4 312 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 SRGAP1Q7Z6B7 1085 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 ANKRD36BP1Q96IX9 119 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TACO1Q9BSH4 297 aaKnown RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 MAGEF1Q9HAY2 307 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
CHD7-203ENST00000525508 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TRIM49P0CI25 452 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TRIM49CP0CI26 452 aa9.01□□□□□ -0.97
CHD7-203ENST00000525508 TSTA3Q13630 321 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms