RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ALG1L2C9J202 215 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 CBX4O00257 560 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 MYO1BO43795 1136 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 GRK2P25098 689 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 GRK3P35626 688 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 SCNN1BP51168 640 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 IL2P60568 153 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 ZNF200P98182 395 aaPredicted RBP7.95□□□□□ -1.14
SKP1-213ENST00000524288 EXOSC10Q01780 885 aaKnown RBP7.95□□□□□ -1.14
SKP1-213ENST00000524288 CABP7Q86V35 215 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 MTMR8Q96EF0 704 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 TTC1Q99614 292 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 RNF38Q9H0F5 515 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 CLDND1Q9NY35 253 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 GULP1Q9UBP9 304 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
SKP1-213ENST00000524288 NCANO14594 1321 aa7.95□□□□□ -1.14
SKP1-213ENST00000524288 B8ZZF3 427 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 PRRG2O14669 202 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 GPR39O43194 453 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 NPTXRO95502 500 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 FBLN1P23142 703 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 FPR2P25090 351 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 SART3Q15020 963 aaKnown RBP7.94□□□□□ -1.14
SKP1-213ENST00000524288 TMEM177Q53S58 311 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 NOL8Q76FK4 1167 aaKnown RBP7.94□□□□□ -1.14
SKP1-213ENST00000524288 NLRP10Q86W26 655 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 TEX2Q8IWB9 1127 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 LINC01356Q8N9X3 169 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 PWWP2AQ96N64 755 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 JAM3Q9BX67 310 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 CCDC8Q9H0W5 538 aaPredicted RBP7.94□□□□□ -1.14
SKP1-213ENST00000524288 IFT22Q9H7X7 185 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 SLC5A4Q9NY91 659 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 CBLCQ9ULV8 474 aa7.94□□□□□ -1.14
SKP1-213ENST00000524288 TIMM13Q9Y5L4 95 aaPredicted RBP7.94□□□□□ -1.14
SKP1-213ENST00000524288 TRAF5O00463 557 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 KCNK3O14649 394 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 GLI4P10075 376 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 PMLP29590 882 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 ADCYAP1R1P41586 468 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
SKP1-213ENST00000524288 ST5P78524 1137 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 ITKQ08881 620 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 LSAMPQ13449 338 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 MTMR1Q13613 665 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 DPF3Q92784 378 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 C20orf173Q96LM9 149 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 CELF4Q9BZC1 486 aaKnown RBP7.93□□□□□ -1.14
SKP1-213ENST00000524288 CABP5Q9NP86 173 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 CATSPERZQ9NTU4 200 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 THG1LQ9NWX6 298 aaKnown RBP7.93□□□□□ -1.14
SKP1-213ENST00000524288 RTEL1Q9NZ71 1219 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 MARCH2Q9P0N8 246 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 CHPF2Q9P2E5 772 aa7.93□□□□□ -1.14
SKP1-213ENST00000524288 FAM47E-STBD1D6RA91 191 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 NPHS1O60500 1241 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 GAS7O60861 476 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 KRT37O76014 449 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 BPIP17213 487 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 KRT15P19012 456 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 DSG1Q02413 1049 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 FAM47CQ5HY64 1035 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 SPATS2Q86XZ4 545 aaKnown RBP7.92□□□□□ -1.14
SKP1-213ENST00000524288 CHST14Q8NCH0 376 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 CHTF18Q8WVB6 975 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 FBXW5Q969U6 566 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 RELTQ969Z4 430 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 ASPSCR1Q9BZE9 553 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 TRIM8Q9BZR9 551 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 LUC7LQ9NQ29 371 aaKnown RBP7.92□□□□□ -1.14
SKP1-213ENST00000524288 H2AFY2Q9P0M6 372 aaPredicted RBP7.92□□□□□ -1.14
SKP1-213ENST00000524288 DBR1Q9UK59 544 aaKnown RBP7.92□□□□□ -1.14
SKP1-213ENST00000524288 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 ZKSCAN5Q9Y2L8 839 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 RWDD3Q9Y3V2 267 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 PHLDB1Q86UU1 1377 aa7.92□□□□□ -1.14
SKP1-213ENST00000524288 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
SKP1-213ENST00000524288 PTPDC1A2A3K4 754 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 F8W031 263 aaPredicted RBP7.91□□□□□ -1.14
SKP1-213ENST00000524288 BRINP1O60477 761 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 ALDH1L1O75891 902 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 FKBP9O95302 570 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 F2P00734 622 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 TACR1P25103 407 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 NCKAP1LP55160 1127 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 RNF219Q5W0B1 726 aaPredicted RBP7.91□□□□□ -1.14
SKP1-213ENST00000524288 FKBP9P1Q75LS8 142 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 CEP68Q76N32 757 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 OVCH1Q7RTY7 1134 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 FMNL3Q8IVF7 1028 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 LZTR1Q8N653 840 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 NETO2Q8NC67 525 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 SMC1BQ8NDV3 1235 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 TSPAN17Q96FV3 270 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 TMEM169Q96HH4 297 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 XYLT2Q9H1B5 865 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 SPTLC3Q9NUV7 552 aa7.91□□□□□ -1.14
SKP1-213ENST00000524288 PPP1R11O60927 126 aaPredicted RBP7.9□□□□□ -1.14
SKP1-213ENST00000524288 COL6A2P12110 1019 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms